Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15e08
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 31 0.15
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 31 0.20
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 29 0.47
SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol pyrop... 29 0.82
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 29 0.82
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.9
SPBP8B7.24c |atg8||autophagy associated protein Atg8 |Schizosacc... 27 2.5
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.5
SPAC8F11.07c |cdc24||DNA replication protein Cdc24|Schizosacchar... 27 3.3
SPCC24B10.21 |tpi1|tpi|triosephosphate isomerase|Schizosaccharom... 26 4.4
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 26 4.4
SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|ch... 26 4.4
SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces p... 26 4.4
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 26 5.8
SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription te... 26 5.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 5.8
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.7
SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces pomb... 25 7.7
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 25 7.7
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 25 7.7
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 31.1 bits (67), Expect = 0.15
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Frame = +2
Query: 287 RKRLPVTWSPEIDIKRNSSFHSSVR--TPPKITPGRISP--PKL----GVTLRSTPRKRL 442
RK LP T SP+++ + +S S R TP K+ P + PKL VT STP K L
Sbjct: 422 RKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPPSTVPKMNPKLQGGNSVTAPSTPSKVL 481
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 30.7 bits (66), Expect = 0.20
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = -2
Query: 528 FNLNFCGVLISLKSIFSGVNGILSVSPISRRLRGVDRNVTPSLGGEIRPGV--ILGGVRT 355
FN + G+L +I + + G S++ + + G+++ ++ GG ++ G+ IL +++
Sbjct: 866 FNNHILGILAEFSNILNDLKGKTSINEKIKTIVGIEKMLS-LCGGAVKLGLPQILSNLQS 924
Query: 354 EEWKEELRFMSI 319
E LRF +I
Sbjct: 925 AFQNEHLRFYAI 936
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 29.5 bits (63), Expect = 0.47
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 23 QMDPPAGSFRQASESYRTATAPMEGAVTPEGG 118
QM+ P G+F S +Y T+ A G VT E G
Sbjct: 666 QMNHPTGTFGNVSGNYNTSPAQSVGDVTAEEG 697
>SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol
pyrophosphate phosphatase fusion 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 28.7 bits (61), Expect = 0.82
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = -2
Query: 615 IGPLYSLSKTFSTLDLFMGGVFLIEHS*LFNLNFCGVLISLKSIFSGVNGILSVSPISRR 436
IG SLS F L L GG+FL + + LI+L S SG+N I SP +
Sbjct: 90 IGNEDSLSNGFYALGLSQGGLFLRALAQTCDAAKIRSLITLGSPHSGINTIPGCSPTNLI 149
Query: 435 LRGVDRNV 412
+ V ++
Sbjct: 150 CKAVVHSI 157
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 28.7 bits (61), Expect = 0.82
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 504 LISLKSIFSGVNGILSVSPISRRLRGVDRNVTPSLGGEI 388
L++L G + I R LRG DRN+ SL G++
Sbjct: 574 LLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLSGKM 612
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 266 QLIQQRGRKRLPVTWSPEIDIKRNSSFHSSVRTPPKITPGRISPPKLGVTLRSTPRKRLL 445
Q IQ RK+ + P +++ SF +V+ PP++ +I K L + P+
Sbjct: 143 QFIQIESRKKRKNSPDPWANLQTKPSFGETVQAPPELPELKIKETKY---LENVPKVN-N 198
Query: 446 MGETE 460
MG+TE
Sbjct: 199 MGQTE 203
>SPBP8B7.24c |atg8||autophagy associated protein Atg8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 419 RSTPRKRLLMGETERIPLTPEKIDFSDISTPQKFK 523
R T +R+ +RIP+ EK+D SDI+ K K
Sbjct: 14 RKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKK 48
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 2.5
Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 8/175 (4%)
Frame = +2
Query: 143 AEIPGFLDRLRVTPLQTLTNTRDLSPALPAGYLSPAPSP--DEQLIQQRGRKRLPVTWSP 316
A +P L+ L L N P+ S SP E ++ Q+G ++ + SP
Sbjct: 907 ANVPALLNSFSSPQLSPLVNRVLNEPSSSPLSSSSLKSPLSKEGVLNQQGHEQYNFSLSP 966
Query: 317 EIDIKRNSSFHSSVRTPPKITPGRISPPKLGVTLRSTPRK---RLLMGETERIPLTPEKI 487
I RN + P P + S PKL L +T + R L+ + +T
Sbjct: 967 SI---RN-------KLSPICRPSQGSSPKLKNNLSNTEERMGSRALLDDKTDSVITASNS 1016
Query: 488 DFSDISTPQKFKLNNQE---CSIKNTPPMKRSRVEKVLDKEYRGPIDTALKGLSP 643
S +S + NN E +NT + RS K L E P AL +P
Sbjct: 1017 TTSGLSRDESSNPNNYELLNAFNQNTWKISRSTSNKSLIPE--SPWGVALGAFTP 1069
>SPAC8F11.07c |cdc24||DNA replication protein
Cdc24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 504 LISLKSIFSGVNGILSVSPISRRLRGVDRNVT 409
L ++FSGV+G L + P++ + G N+T
Sbjct: 373 LCKFSNLFSGVSGHLKIQPLTLVITGFVANLT 404
>SPCC24B10.21 |tpi1|tpi|triosephosphate
isomerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 249
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 411 TPSLGGEIRPG--VILGG-VRTEEWKEELRFMSISGDHVTGSRLRP 283
T LG + G VI GG V KE L+F I G V G+ L+P
Sbjct: 193 TNKLGASVAEGLRVIYGGSVNGGNCKEFLKFHDIDGFLVGGASLKP 238
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 530 NQECSIKNTPPMKRSRVEKVLD 595
N E NTPP K+S ++KV D
Sbjct: 570 NSEDLESNTPPQKKSALQKVAD 591
>SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 388
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 164 DRLRVTPLQTLTNTRDLSPALPAGYLSPAPSPDE 265
D + PL NT PAL AG+L P S DE
Sbjct: 249 DEMLEIPLGKHNNTN--LPALTAGFLDPVESDDE 280
>SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 208
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 461 RIPLTPEKID-FSDISTPQKFKLNNQECSIKNTPPMKRSRV-EKVLDKEYRGPIDTALKG 634
++P + EK S++ T K N+E + + PP+K+ V E + + + P LK
Sbjct: 76 KVPASNEKAARVSNLKTVPSLKRENKEVNANSKPPVKQQEVIESTVISKSQSPSVKQLKL 135
Query: 635 LSPTQL 652
T L
Sbjct: 136 TESTLL 141
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 203 TRDLSPALPAGYLSPAPSPDEQLIQQR 283
T D G L+P P P EQL+++R
Sbjct: 220 TIDFPALFMQGPLAPPPKPQEQLLKER 246
>SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription
termination factor Reb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 504
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 262 VGRR-SRTEVACRQRWRQVPCVGEGLQRS 179
+GR+ +R CR RWR V G+ L+R+
Sbjct: 338 IGRKMARMPNDCRDRWRDVVRFGDKLKRN 366
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 5.8
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Frame = +1
Query: 166 PAAGDSAADPHQHKGPVASAACRLPQSGS-VARRATYTAERSQATASNVVSRDRHKTQLF 342
P A HK A A R PQSG+ VA +A Y++ +V + K +
Sbjct: 565 PPANAPIVSSDVHKNENAGTARRAPQSGAFVASKAKYSSPYD--LPEEIVQVAQQKRSVS 622
Query: 343 LPLLRSYSP*NHTRTYFPSQTRSHVTIHTAQASANGRNRENPIN 474
R YS R PS + + Q +A NPI+
Sbjct: 623 QNYNRQYS--FQPRPATPSNPPRSLPPPSGQVNAPMSQTPNPIS 664
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 71 RTATAPMEGAVTPEGGRRTTRAALAEIPGFLD 166
+T T+P E V PEG R A + FLD
Sbjct: 754 KTNTSPQEPGVVPEGWNFDFRLKNARVSIFLD 785
>SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 519
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -1
Query: 367 GSTNGGVEGRVAFY--VDLWRPRYWQSLATSLLYKLLV 260
G G GR++ Y +D+W YW + + LL +LV
Sbjct: 325 GLALGVYTGRISNYRPLDIWLKGYWGRVVSILLNTILV 362
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 329 KRNSSFHSSVRTPPKITPGRISPPKLGVTLRSTPR 433
K N HS+ PP T P+ G T+ S+PR
Sbjct: 3 KNNPFVHSNANFPPLQTHNFEDIPEKGYTIFSSPR 37
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 7.7
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -2
Query: 306 VTGSRLRPLCCISCSSGDGAGLR*PAGSAGDRSLVLVRVCS-GVTRSRSKKPGISASAAR 130
+TG +++ I ++G GA D L + + + + A R
Sbjct: 212 MTGKKIKGTVLIDAANGVGAAKIKELAKYIDPKLFPIEIVNDNIDNPELLNNSCGADFVR 271
Query: 129 VVRRPPSGVTAPSIGAVAVR*DSDACR 49
++PP+G++AP A D DA R
Sbjct: 272 TQQKPPNGISAPK-HARCASFDGDADR 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,030,052
Number of Sequences: 5004
Number of extensions: 66537
Number of successful extensions: 235
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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