Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15e08
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 35 0.052
05_07_0220 + 28482589-28483752 35 0.069
12_02_0674 - 21745321-21746223,21746229-21747608 33 0.28
11_04_0293 + 15926561-15928834 31 0.64
11_06_0610 - 25449085-25453284 31 0.84
07_01_0029 + 235052-235252,235328-236104 31 1.1
03_01_0565 - 4181899-4182324 31 1.1
07_01_0072 - 525351-525494,526029-526256,526345-526458,527616-52... 30 1.5
05_01_0299 - 2322204-2322734,2324089-2326164 30 1.5
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 30 1.5
01_01_0319 - 2574583-2574675,2575853-2576055,2576140-2576364,257... 30 1.5
03_05_0933 + 28933139-28933531 30 2.0
12_01_0002 - 4477-6144,6571-7440 29 2.6
11_01_0003 - 6099-7766,8193-9062 29 2.6
07_03_0929 - 22702297-22703010,22703095-22703432,22703668-22703893 29 2.6
06_03_1310 + 29238644-29240260 29 2.6
08_01_0915 + 9019499-9020971 29 3.4
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 29 3.4
06_01_0107 - 854756-854883,855126-856968 29 3.4
12_02_0491 + 19648754-19650021,19650135-19650248,19650871-196514... 29 4.5
03_05_0906 + 28671977-28672111,28672197-28672253,28672678-286728... 29 4.5
10_07_0135 + 13308839-13308899,13310146-13310495,13310574-133107... 28 6.0
07_01_0864 - 7185070-7185141,7185274-7185402,7185585-7185695,718... 28 6.0
06_03_0431 + 20713186-20713977 28 6.0
04_04_0788 + 28064684-28066584,28066692-28066815,28066908-280672... 28 6.0
01_05_0736 - 24760576-24760690,24760885-24761108,24761188-247612... 28 6.0
11_06_0335 + 22441240-22441548,22441958-22442028,22442321-224423... 28 7.9
10_08_0559 - 18771235-18771537 28 7.9
09_06_0345 + 22428356-22428547,22428920-22429363 28 7.9
09_03_0081 + 12163213-12164088 28 7.9
07_03_0854 + 22029025-22030269 28 7.9
07_03_0486 - 18634813-18635168,18635258-18638726 28 7.9
04_04_1371 + 32995337-32995358,32995745-32995822,32995876-329960... 28 7.9
03_02_0796 - 11251958-11251971,11252220-11252301,11252420-112525... 28 7.9
02_05_0202 + 26708049-26709074 28 7.9
01_01_0685 + 5257336-5257653,5259021-5259073,5259144-5259240,525... 28 7.9
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 35.1 bits (77), Expect = 0.052
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +1
Query: 205 KGPVASAACRLPQSGSVARRATYTAERSQATASNVVSRDRHKTQLFLPLLRSYSP*NHTR 384
K + A R S S R Y++ S + R ++ RSYSP R
Sbjct: 113 KSSCVTPARRYSPSYSPVERDRYSSRYSPERERSYSPYGRRRSYSPYNRRRSYSPYERRR 172
Query: 385 TYFPSQTRSHVTIHTAQASANGRNRE-NPINTRENRLQRY 501
+Y P + R + + S GR R +P +TR +R + Y
Sbjct: 173 SYSPHERRQSYSPYGRSPSPYGRRRSYSPYDTRGSRRRSY 212
>05_07_0220 + 28482589-28483752
Length = 387
Score = 34.7 bits (76), Expect = 0.069
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 38 AGSFRQASESYRTATAPMEGAVTPEGGRRTTRAALAEIPGFLDRLRVTPLQTLTNTRDLS 217
A + RQ + R A + + GGR+++ ALA G L RLR+ QT+
Sbjct: 124 AAALRQENAELRVANNDLACRIAKFGGRQSSAIALA---GDLRRLRLPKEQTVPALPPPP 180
Query: 218 PALPAGYLSPAPSPDEQLI 274
+ PA ++P P++Q +
Sbjct: 181 QSPPAALMNPVAVPEKQAV 199
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 32.7 bits (71), Expect = 0.28
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +2
Query: 185 LQTLTNTRDLSPALPAGYLSPAPSPDEQLIQQRGRKRLPVTWSPEIDIKRN-SSFHSSVR 361
+ T T T +LS A G L P+P+ G P + P R S+ +
Sbjct: 468 IPTTTGTSELSTA-STGEL-PSPTVKIPTTACTGELSTPTSQIPSTASTRELSTATGKIP 525
Query: 362 TPPKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFS 496
+ P+ P + K+ STPR LL T +IP TP + S
Sbjct: 526 STPRTNPLSTATSKIP----STPRTSLLSSSTSKIPSTPSTCELS 566
>11_04_0293 + 15926561-15928834
Length = 757
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 516 FCGVLISLKSIFSGVNGILSVSP 448
FCGV I + FSG+NG+L +P
Sbjct: 535 FCGVTIQILQQFSGINGVLYYTP 557
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 0.84
Identities = 28/101 (27%), Positives = 42/101 (41%)
Frame = +2
Query: 182 PLQTLTNTRDLSPALPAGYLSPAPSPDEQLIQQRGRKRLPVTWSPEIDIKRNSSFHSSVR 361
PL T T + SP Y+ P+P ++ + P + ++S H+ V
Sbjct: 996 PLPPHTPTINSSPPSEEEYMPPSPVKSSPPPAEKSQPP-PSPVESVLPPVKSSPPHAPVI 1054
Query: 362 TPPKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEK 484
+ P P + SPP++ VT P K E P TPEK
Sbjct: 1055 SEPP--PTKSSPPQVPVTSEPPPAKSSPPHEPISPPETPEK 1093
>07_01_0029 + 235052-235252,235328-236104
Length = 325
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +2
Query: 23 QMDPPAGSFRQASESYRTATAPMEGAVTPEGGRRTTRAALAEIPGFLDRLRVTPLQTLTN 202
Q+ PP +F Q S+ + + V GG A A F DRL L N
Sbjct: 155 QLPPPTANFTQLSQMFAAKGLDAKDLVVLSGGHTLGTAHCAL---FSDRL--YNFTGLVN 209
Query: 203 TRDLSPALPAGYLS 244
D+ PAL A Y++
Sbjct: 210 DGDVDPALDAAYMA 223
>03_01_0565 - 4181899-4182324
Length = 141
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Frame = -2
Query: 399 GGEIRPGVILGGVRTEEWKE----ELRFMSISGDHVTGSRLR---PLCCISCSSGDGAGL 241
G E+ PGV++ V EW E LR + + G R R C C G L
Sbjct: 10 GQEVNPGVVVAAVVEVEWAECACCGLR-EECTPTYAAGVRARYGGRWLCGLCGEAVGEEL 68
Query: 240 R*PAGSAGDRSLVLVRVCSGVTR 172
G AGD V+V V + + R
Sbjct: 69 AAAGGGAGDDGSVVVEVEAAIAR 91
>07_01_0072 -
525351-525494,526029-526256,526345-526458,527616-527747,
529086-529265,529376-529507,529879-530055,530536-530718,
530894-530938,531192-531306,531770-532128,532700-532939
Length = 682
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/92 (27%), Positives = 38/92 (41%)
Frame = +2
Query: 188 QTLTNTRDLSPALPAGYLSPAPSPDEQLIQQRGRKRLPVTWSPEIDIKRNSSFHSSVRTP 367
Q R LSP G+L A DE+ Q G +R+P E +++ + + +
Sbjct: 502 QPARQRRQLSP----GFLEDALDEDEEPDHQYGSRRMPARSRFEDELEAEALAERRIVSA 557
Query: 368 PKITPGRISPPKLGVTLRSTPRKRLLMGETER 463
K + GR P K R R+ E+ER
Sbjct: 558 KKSSMGRNIPRKPSFPARPPRRQANEYSESER 589
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 29 DPPAGSFRQASESYRTATAPMEGAVTPEGGRRTTRAALAEIPGFLDRL--RVTPLQTLTN 202
D S + +S+ + +A M+G P T AAL P F +L + PL +
Sbjct: 410 DSTTSSLKASSKVGKGFSASMKGPEVPPD-LSFTGAALPSNPSFDAKLSSNLNPLPAAST 468
Query: 203 TRDLSPALPAGYLSPAPS 256
LS LP+ SPAPS
Sbjct: 469 DLSLSLPLPSSNDSPAPS 486
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 30.3 bits (65), Expect = 1.5
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 16/158 (10%)
Frame = +2
Query: 227 PAGYLSPAPSPDEQLIQQRGRKRLPVTWSPEIDIKRNSSFHSS---------VRTPPKIT 379
P + P SPD Q + R P++ S E+ + ++ SS +PP I+
Sbjct: 1117 PQSKILPESSPDNQDAEHEYRSPPPISESKELSPQSRTTPGSSPDNQDTEREYPSPPPIS 1176
Query: 380 PGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSDIS--TPQKFKLNNQ---EC- 541
+ P+ L S+P + E P PE I+ S S P+ N EC
Sbjct: 1177 GSKEISPQSRTILESSPDNQDNGHEYPSPPPIPESIELSPHSKALPESSPDNQDIEPECP 1236
Query: 542 SIKNTPPMKR-SRVEKVLDKEYRGPIDTALKGLSPTQL 652
S P K SR K+L + G D + SP Q+
Sbjct: 1237 SPPQIPESKELSRQSKILPESSPGNQDIEPECPSPPQI 1274
>01_01_0319 -
2574583-2574675,2575853-2576055,2576140-2576364,
2576590-2576603,2577146-2577210
Length = 199
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +2
Query: 389 ISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSDISTPQKFKLNNQECSIKNTPPMK 568
++P KL ++ TP K L + E + TP K+ S++ TP + +++ E K +
Sbjct: 50 VTPGKLQISKIETPHK-LQISEVQ----TPHKLQISEVETPHQLQISEVEIKSKEVQALV 104
Query: 569 RSRVEKVLDKE 601
++ + + +E
Sbjct: 105 LAQDSQRISQE 115
>03_05_0933 + 28933139-28933531
Length = 130
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 359 RTPPKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSDISTPQKFKLNNQ 535
R PP I P + PP G + R++ G P T K+ F+D + + L+++
Sbjct: 24 RQPPAILPPALDPPTDGGEMYGPGRRKADKGGEAHAPQTLSKLAFADAAAVIRAHLDHR 82
>12_01_0002 - 4477-6144,6571-7440
Length = 845
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 157 LLGPAAGDSAADPHQHKGPVASAACRLPQSGSVARRATYTAERSQATASNVVSRDRHKTQ 336
LL ++A +PH P A+C +GS+ R A +QA + + + D TQ
Sbjct: 679 LLERCVAEAAGEPHFPWSPPFPASCYHKVAGSLGRMAQLLYLYTQAHPTPIPAADEDATQ 738
Query: 337 LF 342
F
Sbjct: 739 RF 740
>11_01_0003 - 6099-7766,8193-9062
Length = 845
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 157 LLGPAAGDSAADPHQHKGPVASAACRLPQSGSVARRATYTAERSQATASNVVSRDRHKTQ 336
LL ++A +PH P A+C +GS+ R A +QA + + + D TQ
Sbjct: 679 LLERCVAEAAGEPHFPWSPPFPASCYHKVAGSLGRMAQLLYLYTQAHPTPIPAADEDATQ 738
Query: 337 LF 342
F
Sbjct: 739 RF 740
>07_03_0929 - 22702297-22703010,22703095-22703432,22703668-22703893
Length = 425
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2
Query: 147 SASAARVVRRPPSGVTAPSIGAVAVR*D 64
SA+A RRPP +T S GAV++R D
Sbjct: 163 SAAAVATTRRPPPPITGGSKGAVSLRLD 190
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 3/103 (2%)
Frame = +2
Query: 215 SPALPAGYLSPAPS---PDEQLIQQRGRKRLPVTWSPEIDIKRNSSFHSSVRTPPKITPG 385
+P P SP PS P + + +P + SP +S SS +PP PG
Sbjct: 394 TPPTPPPPSSPTPSHLPPPPPTYSESPKSSMPPSTSPPSS--HGASPPSSSSSPPTEHPG 451
Query: 386 RISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSDISTPQ 514
+ PP +TP G +P TP S S PQ
Sbjct: 452 YVLPPLTPPPPTTTP-----PGHHAPVPGTPSSPPSSSWSPPQ 489
>08_01_0915 + 9019499-9020971
Length = 490
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = -2
Query: 498 SLKSIFSGVNGILSVSPISRRLRGVDRNVTPSLGGEIRPGVILGGVRTEEWKEELRFMSI 319
SL+ + G N + PIS + N LGG I+G + T+ WK +L F+++
Sbjct: 354 SLQMLDVGQNNLAGAMPISIANLSKELNWI-DLGGN----QIIGTIHTDLWKLKLIFLNL 408
Query: 318 SGDHVTGS 295
S + +TG+
Sbjct: 409 SYNLLTGT 416
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 362 TPPKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSDISTP 511
+P + PG P G RS P LL G+T R L DF + P
Sbjct: 11 SPRRSRPGPSPPAYGGCAKRSAPPPPLLAGKTTRSNLVGCNFDFCPLKLP 60
>06_01_0107 - 854756-854883,855126-856968
Length = 656
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 522 LNFCGVLISLKSIFSGVNGILSVSPISRRLRGVDRNVTPSLG 397
L F + +KS+F+G G++ SP + L DR LG
Sbjct: 403 LLFATSIKDIKSVFAGSGGVMPASPAGKPLVAADREKLVILG 444
>12_02_0491 +
19648754-19650021,19650135-19650248,19650871-19651427,
19651446-19651529,19651566-19651783,19652004-19652309
Length = 848
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = -2
Query: 630 LRAVSIGPLYSLSKTFSTLDLFMGGVFLIEHS*LFNLNFCGVLISLKSIFSGVNGILSVS 451
+ A G ++++ T L++ G L+EH G+L++ SGV +S S
Sbjct: 730 VEARPFGSSHTVATTIVQLEVSPAGTLLLEHG-------DGMLLTTTVDMSGVTVHVSPS 782
Query: 450 PISRRLRGVDRNVTPSLGGEIR 385
+ RR RG+ VT G ++
Sbjct: 783 SLRRRGRGLMSGVTAPARGSMK 804
>03_05_0906 +
28671977-28672111,28672197-28672253,28672678-28672854,
28672935-28673021,28675339-28675403,28676914-28677010,
28677162-28677248
Length = 234
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 485 IDFSDISTPQKFKLNNQECSIKNTPPMKRSRVEKVLDKEYR 607
+D S+ TPQ ++ ++ I+ PP S + K L K R
Sbjct: 170 MDKSNFPTPQNISMSGKDMKIEELPPPPPSLISKHLAKNQR 210
>10_07_0135 +
13308839-13308899,13310146-13310495,13310574-13310709,
13310806-13310942,13311041-13311164,13313393-13313871
Length = 428
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2
Query: 239 LSPAPSPDEQLIQQRGRKRLPVTWSPEIDIKRNSSFHSSVRTPPKITPGRISPPKLGVTL 418
+ P S + +QQ + VT SP++D +R SS S R+P ++ P SP +L +
Sbjct: 354 MRPQMSEVLEKLQQLQDPKYNVT-SPQVDTRRRSSSGSVPRSPMRMQP---SPRRLSASA 409
Query: 419 RSTP 430
P
Sbjct: 410 SPLP 413
>07_01_0864 -
7185070-7185141,7185274-7185402,7185585-7185695,
7186114-7186292,7186479-7186576,7186691-7186956,
7187895-7188050,7188131-7188319,7188711-7188824,
7189131-7189273,7189683-7189818,7189954-7190058
Length = 565
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 509 PQKFKLNNQECSIKNTPPMKRSRVEKVLDKEYRGPIDTALKGLSPTQL 652
P ++ Q C PP+ S +E +L +E + P+D+ + + P +
Sbjct: 176 PAEYVEEFQNC-FDRAPPVPYSEIESILREELQQPLDSVYEYIDPVPI 222
>06_03_0431 + 20713186-20713977
Length = 263
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 259 GRRSRTEVACRQRWRQ 212
GRR+ T V CR RWRQ
Sbjct: 208 GRRAATCVVCRARWRQ 223
>04_04_0788 +
28064684-28066584,28066692-28066815,28066908-28067285,
28067286-28067488,28067615-28067897
Length = 962
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Frame = +1
Query: 181 SAADPHQHKGPVASAACRLPQSGSVARRATYTAE-------RSQATASNVVSRDRHKTQL 339
S DPH+ P S+A +G +A TAE S +T +N+++R + +++L
Sbjct: 177 SFQDPHKRFSPSTSSASTSSYAGDSRNQACSTAEAAEVIRCTSMSTGNNLLARSKTRSRL 236
Query: 340 FLP 348
P
Sbjct: 237 MDP 239
>01_05_0736 -
24760576-24760690,24760885-24761108,24761188-24761248,
24761909-24763992
Length = 827
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 199 GEGLQRSHPQPVQEARDLGERGSRGAPPPFRCHRAFHWRCCGPIRFRCLPEGSCRWIHLL 20
G GL S +P++ ++GER SR + +R ++ W CG P +C H L
Sbjct: 98 GHGLPPSPYEPLRP--EIGERYSRQSSGRYRQYQGRQWDGCGVGHGNYNPSYTCSCPHCL 155
>11_06_0335 +
22441240-22441548,22441958-22442028,22442321-22442381,
22443252-22443326,22443431-22443478,22443565-22443666,
22443971-22444032,22444187-22444284,22444361-22444470
Length = 311
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 384 PGVILGGVRTEEWKEELRFMSISGDHVTGSRLRPLCC-ISCSSG 256
PGV+L G R + E RF+ SG V G +RP +SC++G
Sbjct: 46 PGVLLDGSRHQRGGIESRFLIGSG--VDGRLIRPRSTRLSCAAG 87
>10_08_0559 - 18771235-18771537
Length = 100
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 124 APPPFRCHRAFHWRCCGPIRFRCLPEGSC 38
APPP +C C PI F P SC
Sbjct: 28 APPPPQCDPGLLSPCAAPIFFGTAPSASC 56
>09_06_0345 + 22428356-22428547,22428920-22429363
Length = 211
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 202 VGEGLQRSHPQPVQEARDLGERGSRGAPPPF 110
VG+ ++ S +P RD+ ++ RG PPP+
Sbjct: 3 VGKPIKDSSLRPPAHGRDVHKKSRRGRPPPW 33
>09_03_0081 + 12163213-12164088
Length = 291
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 255 DGAGLR*PAGSAGDRSLVLVRVCSGVTRSRS-KKPGISASAARVVRRPPSGVTAPS 91
D A R P ++ D L + C + +++ KK +SASAA P S ++PS
Sbjct: 168 DNAASRGPLHASVDAKLQTL--CQNIAAAKNAKKSSVSASAAATSSAPTSNCSSPS 221
>07_03_0854 + 22029025-22030269
Length = 414
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -2
Query: 255 DGAGLR*PAGSAGDRSLVLVRVCSGVTRSRSKKPGISASAARVVRRPPSGVTAPS 91
DG L G G +L ++ VC + R S P I A VRR P AP+
Sbjct: 120 DGRFLLDRDGGEGGAALRILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGVAPN 174
>07_03_0486 - 18634813-18635168,18635258-18638726
Length = 1274
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 447 ISRRLRGVDRNVTPSLGGEIRPGVILGGVRTEEWKEELRFMSISGDHVTGSRLRPLC 277
+ R L + R T L G + G + V EL F+++SG+H+TG LC
Sbjct: 287 VPRELAALSRARTIDLSGNLLTGELPAEVGQ---LPELSFLALSGNHLTGRIPGDLC 340
>04_04_1371 +
32995337-32995358,32995745-32995822,32995876-32996019,
32997595-32997930,32998014-32998166,32998286-32998501,
32998600-33000695
Length = 1014
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 393 EIRPGVILGGVRTEEWK-EELRFMSISGDHVTGSRLRPLCCIS 268
++ + G + T W +L+ + +SG+H+TGS + +C ++
Sbjct: 625 DLHDNSLSGELDTSFWNLSKLQVLDLSGNHITGSIPQKICSLA 667
>03_02_0796 -
11251958-11251971,11252220-11252301,11252420-11252500,
11252892-11253004,11253081-11253177,11253525-11253839,
11253936-11253984,11254148-11254641,11254772-11254836,
11255074-11255239,11257016-11257654
Length = 704
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 229 CRLPQSGSVARRATYTAERSQATASNVVSRDRHKTQLFLPLL 354
C + S + + A RSQ T S V R RH QL P L
Sbjct: 556 CACSVNKSARTKCSRRAARSQLTESPEVMRARHAVQLLHPAL 597
>02_05_0202 + 26708049-26709074
Length = 341
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 178 HPQPVQEARDLGERGSRGAPPPFRC 104
HPQP D GE G PP C
Sbjct: 240 HPQPPLPEHDAGEEDMDGKAPPHEC 264
>01_01_0685 +
5257336-5257653,5259021-5259073,5259144-5259240,
5259383-5259481,5259573-5259731
Length = 241
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 193 PHQHKGPVASAACRLP---QSGSVARRATYTAERSQATASNVVSRDRHKTQLFLPLL 354
P+QH P S+ C P +SG RR ++ +V + KT F PLL
Sbjct: 21 PYQHSSPPESSQCSTPLGSESGGKRRRGRRGKQKGLGEVVSVHEKKEAKTSPF-PLL 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,173,341
Number of Sequences: 37544
Number of extensions: 550432
Number of successful extensions: 2091
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2085
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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