Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15e08
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125451-11|AAP13763.1| 525|Caenorhabditis elegans Hypothetical... 33 0.25
AF125451-10|AAD12819.2| 511|Caenorhabditis elegans Hypothetical... 33 0.25
AC024200-1|AAF35996.1| 196|Caenorhabditis elegans Hypothetical ... 32 0.44
U42847-2|AAA83604.3| 430|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 31 1.0
AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical... 30 1.3
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 30 1.8
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 29 2.3
Z68160-2|CAA92290.2| 403|Caenorhabditis elegans Hypothetical pr... 29 4.1
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 29 4.1
U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 29 4.1
AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B prote... 29 4.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.1
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81583-4|CAB04669.1| 323|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z68014-4|CAA92026.2| 588|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z36282-2|CAA85288.3| 240|Caenorhabditis elegans Hypothetical pr... 28 5.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 5.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 5.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 5.4
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 28 7.1
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 7.1
U41556-12|AAK39191.2| 477|Caenorhabditis elegans Nuclear hormon... 28 7.1
AY305848-1|AAR11992.1| 477|Caenorhabditis elegans nuclear recep... 28 7.1
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 28 7.1
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 27 9.4
>AF125451-11|AAP13763.1| 525|Caenorhabditis elegans Hypothetical
protein Y37E11B.10b protein.
Length = 525
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 323 DIKRNSSFHSSVRTP-PKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSD 499
D + S S++T P +PG K ++ + +P+K++ + E++P P DFS
Sbjct: 159 DKSQKSQKTGSMKTGIPMRSPGSSMAGKGAMSRKKSPKKQMDALKKEQVPAAP---DFSK 215
Query: 500 ISTPQKFKLNNQECSIKNTPPMKRSRVEKVLDKEYRG 610
S K +++ + P M +S V+ + G
Sbjct: 216 KSKKSKKSKKSKKARVARKPRMPKSSVDSTSSSDESG 252
>AF125451-10|AAD12819.2| 511|Caenorhabditis elegans Hypothetical
protein Y37E11B.10a protein.
Length = 511
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 323 DIKRNSSFHSSVRTP-PKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSD 499
D + S S++T P +PG K ++ + +P+K++ + E++P P DFS
Sbjct: 145 DKSQKSQKTGSMKTGIPMRSPGSSMAGKGAMSRKKSPKKQMDALKKEQVPAAP---DFSK 201
Query: 500 ISTPQKFKLNNQECSIKNTPPMKRSRVEKVLDKEYRG 610
S K +++ + P M +S V+ + G
Sbjct: 202 KSKKSKKSKKSKKARVARKPRMPKSSVDSTSSSDESG 238
>AC024200-1|AAF35996.1| 196|Caenorhabditis elegans Hypothetical
protein Y71F9AL.11 protein.
Length = 196
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -2
Query: 204 VLVRVCSGVTRSRSKKPGISASAARVVRRPPSGVTAPSIGAVAVR 70
+ VRV S V R + +SAS R+ PP +APS+ VA R
Sbjct: 77 IRVRVHSPVPRDPRDRLHVSASPPRLALSPPLNFSAPSVSLVAGR 121
>U42847-2|AAA83604.3| 430|Caenorhabditis elegans Hypothetical
protein F39H12.1 protein.
Length = 430
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 164 DRLRVTPLQTLTNTRDLSPALPAGYLSPAPSP 259
DRLR+ P++ T+ S PA L+PAP+P
Sbjct: 99 DRLRIIPMEFDTDISISSVVSPAAALTPAPAP 130
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 161 LDRLRVTPLQTLTNTRDLSPALPAGYLSPAPSPDEQLIQQRGRKRLPV 304
LD L TP+Q + L+PA+ P P P + KRL V
Sbjct: 43 LDNLAKTPIQLVVQPTPLTPAITPCEAPPPPPPPKPSSDNNNSKRLKV 90
>AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical
protein Y73B3A.6 protein.
Length = 480
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 491 FSDISTPQKFKLNNQECSIKNTPPMKRSRVEKVLDKEYRGPIDTALKGLS 640
F D +T Q N + +I+N PP S ++ LD + GP T +K +
Sbjct: 326 FKDHATIQSCMQNGVDLTIRNIPPGTTSLIQP-LDVHFNGPWKTLIKNFT 374
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +2
Query: 284 GRKRLPVTW-SPEI---DIKRNSSFHSSV---RTPPKITPGRISPPKLGVTLRSTPRKRL 442
GR+ +P++ SP ++KR +S S+V RTPP +TP +PP G+ S R
Sbjct: 300 GRRIVPLSMPSPHAVTPELKRLASKDSNVDRPRTPP-VTPASAAPPPPGIPYNSVAAGR- 357
Query: 443 LMGETERIPLTP 478
T +P TP
Sbjct: 358 --STTTPVPSTP 367
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +2
Query: 284 GRKRLPVTW-SPEI---DIKRNSSFHSSV---RTPPKITPGRISPPKLGVTLRSTPRKRL 442
GR+ +P++ SP ++KR +S S+V RTPP +TP +PP G+ S R
Sbjct: 300 GRRIVPLSMPSPHAVTPELKRLASKDSNVDRPRTPP-VTPASAAPPPPGIPYNSVAAGR- 357
Query: 443 LMGETERIPLTP 478
T +P TP
Sbjct: 358 --STTTPVPSTP 367
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Frame = +2
Query: 188 QTLTNTRDLSPALPAGYLSPAPSPDEQLIQQRGRKRL---PVTWSPEIDIKRNSSFHSSV 358
QT +D +PA PA AP+ QQ+ + P+ PEI +++ S +S
Sbjct: 69 QTGKKAQDAAPA-PASAAPAAPNAPTPTAQQQPSPKASAAPIPEKPEIQVQKVESTQASA 127
Query: 359 RTPPKITP-GRISPPK--LGVTLRSTPRKRLL 445
P P + S PK V L+ +K++L
Sbjct: 128 PIPAPAAPTTQKSSPKERKSVNLKDLDQKKVL 159
>Z68160-2|CAA92290.2| 403|Caenorhabditis elegans Hypothetical
protein D1046.2 protein.
Length = 403
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +1
Query: 460 ENPINT---RENRLQRY*HATEVQIKQSRMLNQEH 555
E+P T R+ R+++Y +Q+++SRM NQ H
Sbjct: 288 EHPTETEIARQMRIEKYREIDALQVRESRMHNQHH 322
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = +2
Query: 311 SPEIDIKRNSSFHSSVRTPPKITP---GRISPPKLGVTLRSTPRKRLLMGETERIPLTPE 481
+P+ K SS + R+ + P R+S + S R R + + T E
Sbjct: 74 TPKTPSKTPSSASARSRSRSRGRPTNASRLSASTPSASSTSVKRSRSVTKTPRDVVKTIE 133
Query: 482 KIDFSD-ISTPQKFKLNNQECSIKNTPPMKRSRVEKVLDKEYRG-PIDT 622
D D ++TP + + N ++ PP RSR+ + + + G P+ T
Sbjct: 134 VADDEDEVTTPSRLRQRNVR-NLTQDPPASRSRLPRAVHHTFEGLPVRT 181
>U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical
protein R151.8 protein.
Length = 731
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 314 PEIDIKRNSSFHSSVRTP-PKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKID 490
PE+ KRN +F SS+RTP P I G L +P E ID
Sbjct: 609 PELQRKRNDAFLSSLRTPDPTPKKDSIMQQYFGGDLSMSPGSTRHASHLETPGGNNTTID 668
Query: 491 FSDI 502
F+D+
Sbjct: 669 FTDM 672
>AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B protein
protein.
Length = 260
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 314 PEIDIKRNSSFHSSVRTP-PKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKID 490
PE+ KRN +F SS+RTP P I G L +P E ID
Sbjct: 138 PELQRKRNDAFLSSLRTPDPTPKKDSIMQQYFGGDLSMSPGSTRHASHLETPGGNNTTID 197
Query: 491 FSDI 502
F+D+
Sbjct: 198 FTDM 201
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 4.1
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +2
Query: 23 QMDPPAGSFRQASESYRTATAPMEGAVTPEGGRRTTRAALAEIPGFLDRLRVTPLQTLTN 202
++ PP + S T T P + A + G R+ + +A +P ++ V P+ +
Sbjct: 727 KVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP----KVTVVPVSRV-- 780
Query: 203 TRDLSPALPAGYLSPAPSPDEQLIQQRGRKRLPVTWSPEIDIKR-----NSSFHSSVRTP 367
++P+ P AP + + K+ +T P + N+S H VR+P
Sbjct: 781 --PVAPSTPLSRRMSAPVVRKPTM--TAEKKREITMKPSVSTSARPSLINTSSHPMVRSP 836
Query: 368 -PKIT 379
PK++
Sbjct: 837 LPKMS 841
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 323 DIKRNSSFHSSVRTPPKITPGRISPPK 403
D +R+ RTPP+ +PGR SPP+
Sbjct: 108 DRRRSPPRRRDRRTPPRRSPGRRSPPR 134
>Z81583-4|CAB04669.1| 323|Caenorhabditis elegans Hypothetical
protein T02G6.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 127 GAPPPFRCHRAFHWRCCGPIRF 62
GA P +RC R W CC P +
Sbjct: 265 GAAPIWRCQRRSMWSCCIPTTY 286
>Z68014-4|CAA92026.2| 588|Caenorhabditis elegans Hypothetical
protein W04G3.4 protein.
Length = 588
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 371 KITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTPEKIDFSDISTPQKFKLNNQECSIK 550
K P + PP L +T L E P++PE S + P+K LN ++
Sbjct: 399 KRLPEPLKPPTLNELKPNTTTITLEALEVLVPPMSPEPTSLSPKAIPEKVALNPSSIIMR 458
Query: 551 NTPPMK 568
N P++
Sbjct: 459 NRVPIE 464
>Z36282-2|CAA85288.3| 240|Caenorhabditis elegans Hypothetical
protein K10G9.2 protein.
Length = 240
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 626 ELCQLGLCTPCPKPFQLSTSSWVECS 549
+LCQL +P P+P ++S S+ CS
Sbjct: 35 DLCQLEPSSPAPRPDEISASTMNACS 60
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 350 SSVRTPPKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTP 478
S++ PP++ G PP LG+ P LLM R ++P
Sbjct: 777 SAIPLPPRLQGGIPPPPPLGIIPPPPPPGNLLMNGINRGDISP 819
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 182 PLQTLTNTRDLSPALPAGYLSPAPSPDEQLIQQRGRKRLP-VTWSPEIDIKRNSSFHSSV 358
P+Q L + P P +PAP P E +G +P VT +P + + + S
Sbjct: 1766 PVQPLPQPQPTEPEEPLPIATPAPQPTEHTYGAQGPNIVPVVTAAPYVPQETQAPIAPSN 1825
Query: 359 RTPPKITPGR-ISPPK 403
P + P + +S P+
Sbjct: 1826 PEPVQPNPSQTVSIPE 1841
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 350 SSVRTPPKITPGRISPPKLGVTLRSTPRKRLLMGETERIPLTP 478
S++ PP++ G PP LG+ P LLM R ++P
Sbjct: 777 SAIPLPPRLQGGIPPPPPLGIIPPPPPPGNLLMNGINRGDISP 819
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 424 HTAQASANGRNRENPINTRENRL---QRY*HATEVQIKQSRMLNQEHSTHEEVES*KG 588
H +A +GR+ E + E + ++ H EVQ R+ N EH + ES KG
Sbjct: 2559 HERKAEIDGRSEELRLLHEEGQALNQEQPEHKAEVQRAHKRVQNSEHQLRQTWESEKG 2616
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 424 HTAQASANGRNRENPINTRENRL---QRY*HATEVQIKQSRMLNQEHSTHEEVES*KG 588
H +A +GR+ E + E + ++ H EVQ R+ N EH + ES KG
Sbjct: 2559 HERKAEIDGRSEELRLLHEEGQALNQEQPEHKAEVQRAHKRVQNSEHQLRQTWESEKG 2616
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 7.1
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Frame = +2
Query: 86 PMEGAVTPEGGRRTTRAALAEIPGFLDRLRVTPLQTLTNTRDLSPALPAG----YLSPAP 253
P + TP +AA A P + TPLQ +++ P Y P
Sbjct: 381 PEPSSTTPSSDPSPKKAAPAVKPRDSSPKKATPLQADPKAQEVPPTPVKNPVKKYKPPWE 440
Query: 254 SPDEQLIQQRGRKRLPVTWSPEIDIK----RNSSFHSSVRTPPKITPGRISPPKLGVTLR 421
DE +++ + P +P + K ++++ ++ +TP TP + P K
Sbjct: 441 VDDEDPVEEVKQPEAPAKKTPVLKRKEPAAKDTAKPATSKTPE--TPEKKDPVK---PRD 495
Query: 422 STPRKRLLMGETERIPLTPEK 484
S+P+K ++ + P TP K
Sbjct: 496 SSPKKVAAKPDSAQAPATPVK 516
>U41556-12|AAK39191.2| 477|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 120 protein.
Length = 477
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -2
Query: 459 SVSPISRRLRGVDRNVTPSLGGEIRPGVILGGVRTEEWKEELRFMSISGDHVTGSRLRPL 280
S+SP+ R D N+ E++P + +R K + S+ GD TG L
Sbjct: 50 SISPL--RSPAEDTNMVECSSNELQPPAPIRKIRNVR-KSDKHHCSVCGDRPTGYHYDVL 106
Query: 279 CCISCSS 259
C C +
Sbjct: 107 SCNGCKT 113
>AY305848-1|AAR11992.1| 477|Caenorhabditis elegans nuclear receptor
NHR-120 protein.
Length = 477
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -2
Query: 459 SVSPISRRLRGVDRNVTPSLGGEIRPGVILGGVRTEEWKEELRFMSISGDHVTGSRLRPL 280
S+SP+ R D N+ E++P + +R K + S+ GD TG L
Sbjct: 50 SISPL--RSPAEDTNMVECSSNELQPPAPIRKIRNVR-KSDKHHCSVCGDRPTGYHYDVL 106
Query: 279 CCISCSS 259
C C +
Sbjct: 107 SCNGCKT 113
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 424 HTAQASANGRNRENPINTRENRL---QRY*HATEVQIKQSRMLNQEHSTHEEVES*KG 588
H +A +GR+ E + E + ++ H EVQ R+ N EH + ES KG
Sbjct: 2559 HERKAEIDGRSEELRLLHEEGQALNQEQPEHKAEVQRAHKRVQNSEHQLRQTWESEKG 2616
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 175 PQPVQEARDLGERGSRGAPPP 113
PQP Q+ R G RG PPP
Sbjct: 838 PQPPQQRRRTESSGYRGGPPP 858
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,315,237
Number of Sequences: 27780
Number of extensions: 406853
Number of successful extensions: 1486
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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