Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15e05
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK124118-1|BAC85777.1| 157|Homo sapiens protein ( Homo sapiens ... 32 2.4
AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein. 31 4.1
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein. 31 5.5
U66033-1|AAC51118.1| 572|Homo sapiens glypican-5 protein. 30 9.6
BC039730-1|AAH39730.1| 572|Homo sapiens glypican 5 protein. 30 9.6
BC014505-1|AAH14505.1| 388|Homo sapiens MLLT4 protein protein. 30 9.6
AL731868-6|CAI40829.1| 388|Homo sapiens myeloid/lymphoid or mix... 30 9.6
AL731868-3|CAI40826.1| 1612|Homo sapiens myeloid/lymphoid or mix... 30 9.6
AL163537-2|CAI13232.1| 572|Homo sapiens glypican 5 protein. 30 9.6
AL162456-1|CAI17090.1| 572|Homo sapiens glypican 5 protein. 30 9.6
AL157821-1|CAC34558.2| 572|Homo sapiens glypican 5 protein. 30 9.6
AL157363-1|CAH71865.1| 572|Homo sapiens glypican 5 protein. 30 9.6
AL138714-1|CAH70260.1| 572|Homo sapiens glypican 5 protein. 30 9.6
AL049698-4|CAI42815.1| 388|Homo sapiens myeloid/lymphoid or mix... 30 9.6
AL049698-3|CAI42814.1| 1612|Homo sapiens myeloid/lymphoid or mix... 30 9.6
AL009178-3|CAI20902.1| 1612|Homo sapiens myeloid/lymphoid or mix... 30 9.6
AF001462-1|AAC12261.1| 572|Homo sapiens glypican-5 protein. 30 9.6
AB011399-3|BAA32485.1| 1611|Homo sapiens AF-6 protein. 30 9.6
AB011399-2|BAA32484.1| 1816|Homo sapiens AF-6 protein. 30 9.6
AB011399-1|BAA32483.1| 1743|Homo sapiens AF-6 protein. 30 9.6
>AK124118-1|BAC85777.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ42124 fis, clone TESTI2009477, weakly similar
to TRICHOHYALIN. ).
Length = 157
Score = 31.9 bits (69), Expect = 2.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -2
Query: 289 RPQQGQNRRHDSHRCGRDSQLPPEHIHLRQQRPQGGEEKEEMRLYRQQ 146
R Q+ Q R+ + ++ Q+ + +R+Q Q GE++E+MR +Q
Sbjct: 64 RKQEEQVRKQEEQMWKQEEQMRKQEEQMRKQEKQMGEQEEQMRKREEQ 111
>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
Length = 6620
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 276 GRIAVTIPIAAGVTPSCRPNTFICGNSGPRAAKK 175
G + T+ +A ++P+C + CGN+ PR K+
Sbjct: 1820 GELGGTVTLACELSPACAEVVWRCGNTQPRVGKR 1853
>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
Length = 1135
Score = 30.7 bits (66), Expect = 5.5
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -3
Query: 393 RQQYEPVITDISSM---NTSF-LCAGQ*STT*PKSGFAVAHSRGRIAVTIPIAAGVTPSC 226
RQ+ EP+ D+ + F L A + ++T P AH RGR AV + G+TP+
Sbjct: 1022 RQKNEPIHLDVVEQPPQRSDFPLAAPENASTGP------AHVRGRTAVETDLTFGLTPN- 1074
Query: 225 RPNTFICGNSGP 190
RP+ C + P
Sbjct: 1075 RPSLSACSSEAP 1086
>U66033-1|AAC51118.1| 572|Homo sapiens glypican-5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>BC039730-1|AAH39730.1| 572|Homo sapiens glypican 5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>BC014505-1|AAH14505.1| 388|Homo sapiens MLLT4 protein protein.
Length = 388
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 72 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 123
>AL731868-6|CAI40829.1| 388|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 388
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 72 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 123
>AL731868-3|CAI40826.1| 1612|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1612
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 358 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 409
>AL163537-2|CAI13232.1| 572|Homo sapiens glypican 5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>AL162456-1|CAI17090.1| 572|Homo sapiens glypican 5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>AL157821-1|CAC34558.2| 572|Homo sapiens glypican 5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>AL157363-1|CAH71865.1| 572|Homo sapiens glypican 5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>AL138714-1|CAH70260.1| 572|Homo sapiens glypican 5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>AL049698-4|CAI42815.1| 388|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 388
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 72 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 123
>AL049698-3|CAI42814.1| 1612|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1612
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 358 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 409
>AL009178-3|CAI20902.1| 1612|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1612
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 358 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 409
>AF001462-1|AAC12261.1| 572|Homo sapiens glypican-5 protein.
Length = 572
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 592 RHEFDLSDPEHGLKRSPRRASEVHAQRRLRFV 687
R FD S +HG+K + R + E A RR F+
Sbjct: 357 RCSFDQSKEKHGMKTTTRNSEETLANRRKEFI 388
>AB011399-3|BAA32485.1| 1611|Homo sapiens AF-6 protein.
Length = 1611
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 358 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 409
>AB011399-2|BAA32484.1| 1816|Homo sapiens AF-6 protein.
Length = 1816
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 358 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 409
>AB011399-1|BAA32483.1| 1743|Homo sapiens AF-6 protein.
Length = 1743
Score = 29.9 bits (64), Expect = 9.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 298 LRSRPQQGQNRRHDSHRCGRDSQLPPEHI-HLRQQRPQGGEEKEEMRLYRQQAFV 137
L + +G+ R S G S LPPE + +L + P G + +++ +LYR Q V
Sbjct: 358 LEGKTPKGKERADGS---GYGSTLPPEKLPYLVELSPDGSDSRDKPKLYRLQLSV 409
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,708,257
Number of Sequences: 237096
Number of extensions: 2253652
Number of successful extensions: 5198
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5195
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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