Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15e01
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical pr... 109 1e-24
AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical ... 109 1e-24
Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 0.72
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 30 1.3
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 30 1.3
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 30 1.3
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 30 1.3
U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 3.9
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 3.9
U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical p... 29 3.9
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 29 3.9
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 29 3.9
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 3.9
U23179-5|AAK68210.2| 347|Caenorhabditis elegans Serpentine rece... 28 5.1
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 28 6.8
U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine rece... 28 6.8
AF068718-4|AAC17765.1| 98|Caenorhabditis elegans Hypothetical ... 28 6.8
AF039051-8|AAB94268.3| 309|Caenorhabditis elegans Serpentine re... 28 6.8
AF016422-5|AAG24171.1| 291|Caenorhabditis elegans Serpentine re... 28 6.8
U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical pr... 27 8.9
U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical ... 27 8.9
AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso... 27 8.9
>Z70205-9|CAA94121.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 109 bits (263), Expect = 1e-24
Identities = 55/155 (35%), Positives = 91/155 (58%)
Frame = +1
Query: 166 RCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDR 345
+CE+C + + E + + + KVH+ + + +Q+ + E +C+
Sbjct: 29 KCEICALTSMEFEAK---SVKVHKQTRLKFLFIWF-----FLFQRLSSEFADITENICNG 80
Query: 346 ILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQC 525
E+ IHKE++ RF++ S+T +TL + +KGVKV+LG+P E+WD+PSAEI ++ C
Sbjct: 81 FNEFKIHKEKTGLERFSRAQSKTIETLKQMREKGVKVELGMPFEMWDQPSAEIFALRQGC 140
Query: 526 ESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALK 630
ESLLE+ E +E+W+ N EDL LC ++ALK
Sbjct: 141 ESLLEDYEDLIEEWFINKASLEDLFKQLCARNALK 175
>AL031265-1|CAA20327.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.7 protein.
Length = 191
Score = 109 bits (263), Expect = 1e-24
Identities = 55/155 (35%), Positives = 91/155 (58%)
Frame = +1
Query: 166 RCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDR 345
+CE+C + + E + + + KVH+ + + +Q+ + E +C+
Sbjct: 29 KCEICALTSMEFEAK---SVKVHKQTRLKFLFIWF-----FLFQRLSSEFADITENICNG 80
Query: 346 ILEYNIHKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQC 525
E+ IHKE++ RF++ S+T +TL + +KGVKV+LG+P E+WD+PSAEI ++ C
Sbjct: 81 FNEFKIHKEKTGLERFSRAQSKTIETLKQMREKGVKVELGMPFEMWDQPSAEIFALRQGC 140
Query: 526 ESLLEENEIAVEDWYWNHQGKEDLKIYLCTKHALK 630
ESLLE+ E +E+W+ N EDL LC ++ALK
Sbjct: 141 ESLLEDYEDLIEEWFINKASLEDLFKQLCARNALK 175
>Z73896-7|CAO82025.1| 310|Caenorhabditis elegans Hypothetical
protein F09E8.2b protein.
Length = 310
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 133 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKT--KYQKSE 306
S+++V +K +C C L + L++T + H ++ D ++K KY+ SE
Sbjct: 16 SQKEVTIKN-EKCRTCNFLVSTFDEGLKKTARHH------FAGGDTAWEEKNLGKYKTSE 68
Query: 307 LRLIESLEGVCDR 345
RLIE LEGVC +
Sbjct: 69 TRLIEVLEGVCKK 81
>Z73896-6|CAA98055.1| 356|Caenorhabditis elegans Hypothetical
protein F09E8.2a protein.
Length = 356
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 133 SEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKT--KYQKSE 306
S+++V +K +C C L + L++T + H ++ D ++K KY+ SE
Sbjct: 16 SQKEVTIKN-EKCRTCNFLVSTFDEGLKKTARHH------FAGGDTAWEEKNLGKYKTSE 68
Query: 307 LRLIESLEGVCDR 345
RLIE LEGVC +
Sbjct: 69 TRLIEVLEGVCKK 81
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.1 bits (67), Expect = 0.72
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +1
Query: 115 DDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKT 288
D N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K
Sbjct: 4093 DGNAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDI 4149
Query: 289 KYQKSELR-LIESLE 330
K K++ + L+++LE
Sbjct: 4150 KDSKTKAKELLQALE 4164
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 121 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 294
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 3192 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 3248
Query: 295 QKSELR-LIESLE 330
K++ + L+++LE
Sbjct: 3249 SKTKAKELLQALE 3261
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 121 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 294
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 5049 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 5105
Query: 295 QKSELR-LIESLE 330
K++ + L+++LE
Sbjct: 5106 SKTKAKELLQALE 5118
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 121 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 294
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 5952 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 6008
Query: 295 QKSELR-LIESLE 330
K++ + L+++LE
Sbjct: 6009 SKTKAKELLQALE 6021
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 121 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 294
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 6855 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 6911
Query: 295 QKSELR-LIESLE 330
K++ + L+++LE
Sbjct: 6912 SKTKAKELLQALE 6924
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 121 NDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKY 294
N +K+ EDV KY N+ + + A + N+L+ T V ++ ++ S D + P+ K K
Sbjct: 7758 NAVKNVEDVVSKYQNQPQPLDV-AKDDANKLKAT--VEQLTKLAESSDKIDPQVAKDIKD 7814
Query: 295 QKSELR-LIESLE 330
K++ + L+++LE
Sbjct: 7815 SKTKAKELLQALE 7827
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 97 RNVICRDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQP 276
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 272 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 330
Query: 277 KKKTKYQK 300
K K K +K
Sbjct: 331 KLKEKVEK 338
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 97 RNVICRDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQP 276
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 306 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 364
Query: 277 KKKTKYQK 300
K K K +K
Sbjct: 365 KLKEKVEK 372
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 97 RNVICRDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQP 276
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 403 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 461
Query: 277 KKKTKYQK 300
K K K +K
Sbjct: 462 KLKEKVEK 469
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 97 RNVICRDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQP 276
+ ++ R++N ++ D V YA+ K EL+++LEE + I+ L +++
Sbjct: 466 KELLNREENHVEQLRDKDVHYASLVRQLKERIDELESKLEEAEERRHSIQ-NLELIELRE 524
Query: 277 KKKTKYQK 300
K K K +K
Sbjct: 525 KLKEKVEK 532
>U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical
protein C06G3.4 protein.
Length = 723
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +1
Query: 187 LATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIES-LEGVCDRILEYNI 363
+A L+NR + GK++EV++I D KT +S+ +I S +EG+ + NI
Sbjct: 74 IANCLKNRSFKLGKINEVLKILLDFDSF----KTPETESQSNMIGSYMEGLSKILKRLNI 129
Query: 364 H-----KERSDSTRFAKGMSQT 414
K SD TR+ +Q+
Sbjct: 130 ARDDSLKSLSDETRYLNRFNQS 151
>Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical
protein C13G3.3b protein.
Length = 561
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 391 FAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLEENE 549
F S KT+HGL+ +K+ + + +L+D+ S + Q ++L EE E
Sbjct: 400 FKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQEKTLNEEKE 452
>Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical
protein C13G3.3a protein.
Length = 557
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 391 FAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLEENE 549
F S KT+HGL+ +K+ + + +L+D+ S + Q ++L EE E
Sbjct: 396 FKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQEKTLNEEKE 448
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 112 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 288
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 289 KYQKSELRLIE 321
+ + L+ E
Sbjct: 593 REKIDILKKYE 603
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 112 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 288
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 289 KYQKSELRLIE 321
+ + L+ E
Sbjct: 593 REKIDILKKYE 603
>Z35639-5|CAA84699.2| 534|Caenorhabditis elegans Hypothetical
protein D2045.9 protein.
Length = 534
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 202 QNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRI 348
Q RL K+ +++ I YSL + +K EL+ + LEG D I
Sbjct: 301 QERLNRMQKIFDILGIEYSLLEATDGQKLDELPEELKNYQILEGYLDPI 349
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 136 EEDVGVKYANRCEVCKILATELQNRLEETGKVH--EVIEIGYSLDDVQPKKKT-KYQKSE 306
+ED K + E K+ TEL+ + ++T + H V ++ S D + +KT K KSE
Sbjct: 289 QEDETRKAIEKLEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKAERLEKTLKVLKSE 348
Query: 307 L 309
L
Sbjct: 349 L 349
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 136 EEDVGVKYANRCEVCKILATELQNRLEETGKVH--EVIEIGYSLDDVQPKKKT-KYQKSE 306
+ED K + E K+ TEL+ + ++T + H V ++ S D + +KT K KSE
Sbjct: 291 QEDETRKAIEKLEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKAERLEKTLKVLKSE 350
Query: 307 L 309
L
Sbjct: 351 L 351
>U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical
protein B0361.2a protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.9
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +1
Query: 181 KILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYN 360
KIL E++ + K+ +E G S DD PK K+K + + +R EG IL +
Sbjct: 84 KILKAEMKGDTDLVKKLKRKLESGISGDDEPPKSKSK-EVTMMR--RDREG---NILPAS 137
Query: 361 IHKERSDSTRFAKGMSQ 411
RSDS R +G S+
Sbjct: 138 --SRRSDSDRHGEGSSR 152
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 136 EEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKYQKSEL 309
E+D +++ N+ + + TE Q E K E++EI D++Q + + +Y E
Sbjct: 835 EQDAYLQHQNKLDDGILKETEAQTTAENPEKSMEMVEIECQTDEIQEELAEDEEYWDEEY 894
Query: 310 RLIESLEG 333
E LEG
Sbjct: 895 WDEEELEG 902
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 136 EEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPK--KKTKYQKSEL 309
E+D +++ N+ + + TE Q E K E++EI D++Q + + +Y E
Sbjct: 835 EQDAYLQHQNKLDDGILKETEAQTTAENPEKSMEMVEIECQTDEIQEELAEDEEYWDEEY 894
Query: 310 RLIESLEG 333
E LEG
Sbjct: 895 WDEEELEG 902
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 112 RDDNDIKSEEDVGVKYANRCEVCKILATELQNRLEE-TGKVHEVIEIGYSLDDVQPKKKT 288
RDD DI + ED +KY + E ++L E+ +++ K E +G D+V ++K
Sbjct: 535 RDDTDIANYEDAIIKYWHHRE--RMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKK 592
Query: 289 KYQKSELRLIE 321
+ + L+ E
Sbjct: 593 REKIDILKKYE 603
>U23179-5|AAK68210.2| 347|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 2 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -2
Query: 466 FRDPLLHLYLRDREGS*MFDSFLWQILYYR--TFLCEYCIPIFYHTHPLKIRLTLIQISD 293
F D + L + F+S+ W++LY F+C CI + H+ K R L Q
Sbjct: 172 FEDSFISFALVPETSAIPFNSYFWELLYAEIGNFICN-CIFLLVHS-KFKARF-LHQQRS 228
Query: 292 ISFSFLVEHRRGSIRF 245
+S +L+E + +F
Sbjct: 229 LSVRYLLEEISQTSKF 244
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 403 FLWQILYYRTFLCEYCIPIFYHTHP 329
FLWQ + + C+ PIFY+ HP
Sbjct: 15 FLWQFGLF--YACQLIFPIFYNFHP 37
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 621 MFCT*IYFEIFFTLMVPIPVFDG 553
+ C I+FE+FF +P+P + G
Sbjct: 317 LLCGLIFFEVFFIFHMPLPFYPG 339
>U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 12 protein.
Length = 348
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 466 FRDPLLHLYLRDREGS*MFDSFLWQILYYR--TFLCEYCIPIFYH 338
F P ++ L + F+SFLW +LY + F+C I +F H
Sbjct: 168 FDKPFINFILVPATSALQFNSFLWYMLYLKITNFICN-LILLFIH 211
>AF068718-4|AAC17765.1| 98|Caenorhabditis elegans Hypothetical
protein R01B10.3 protein.
Length = 98
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 226 KVHEVIEIGYSLDDVQPKK-KTKYQKSELRLIESLEGVCDRILEYNI 363
KV EV +IGYSLD++ K+ + K++ + I G+ +L +I
Sbjct: 27 KVAEVPQIGYSLDELNAKREEPKWRVARYTAIAMFWGIWGALLAGSI 73
>AF039051-8|AAB94268.3| 309|Caenorhabditis elegans Serpentine
receptor, class x protein7 protein.
Length = 309
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = -2
Query: 397 WQILYYRTFLCEYCIPIFYHTHPLKIRLTLIQISDISFSFLVEHRRGSIRFQ*LHELCRS 218
W + Y ++ P FY P I L S I S+ +E R+ + + L +
Sbjct: 235 WSLFYVLPYIVPADKPTFYAAVPFFITLNGSSNSIIFLSYNIEIRK-YLNIKVLWQKLNG 293
Query: 217 LRVCSAIPLLEF 182
+ V S IP+L F
Sbjct: 294 VSVSSNIPVLPF 305
>AF016422-5|AAG24171.1| 291|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 58 protein.
Length = 291
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 358 CIPIFYHTHPLKIRLTLIQISDISFSFLVEH 266
C PI YH H KI L +I I +++ L ++
Sbjct: 111 CAPISYHNHRFKIPLAVIIILISAYTILEQY 141
>U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical
protein F09C12.2 protein.
Length = 418
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 474 QWYSEIHFYTFIYETVKGLKCLTHSFG 394
Q +E HF F Y+ +KGLK L HS G
Sbjct: 139 QTLNEKHFQYFFYQILKGLKYL-HSAG 164
>U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical
protein T26A5.4 protein.
Length = 487
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 229 VHEVIEIGYSLDDVQP---KKKTKYQKSELRLIESLEGVCDRILEYNI 363
++ +++ Y L D Q KKTK + +R + LEG+C ++ +YN+
Sbjct: 144 MYSILQNKYQLTDDQVFGNDKKTK-KAQIVRCVGFLEGLCGKLSDYNL 190
>AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical
protein Y106G6D.1 protein.
Length = 287
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 115 DDNDIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDD 267
++N +S + + K N E CK+L L + G +H + + + DD
Sbjct: 178 ENNFYESRKSINTKLINYMEECKLLQELKDEMLTQKGFLHSIAKKKQTEDD 228
>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 2
protein.
Length = 1086
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/75 (18%), Positives = 36/75 (48%)
Frame = +1
Query: 238 VIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYNIHKERSDSTRFAKGMSQTF 417
++EI DD + +T+Y +++ ++G ++ + ++ + +KG Q
Sbjct: 578 IVEIEIKQDDTEGNGRTQYTGPLSVVVQEVDGAFTHTIQIDGAVSHAEISCHSKGRKQRK 637
Query: 418 KTLHGLVDKGVKVDL 462
K + L + +++DL
Sbjct: 638 KKVPLLTGEEIEIDL 652
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,554,360
Number of Sequences: 27780
Number of extensions: 283966
Number of successful extensions: 942
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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