Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15d16
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical pr... 57 7e-09
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 28 5.1
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 5.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 5.1
M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical pr... 28 5.1
M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 27 8.9
AF016421-11|AAM45373.2| 417|Caenorhabditis elegans Hypothetical... 27 8.9
>U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical
protein C44B7.10 protein.
Length = 471
Score = 57.2 bits (132), Expect = 7e-09
Identities = 32/87 (36%), Positives = 47/87 (54%)
Frame = +2
Query: 284 RKPEYSTAKEAFEKCLKSGLTVFAQGAAATPVPLLNAMTEVGKSGSLRDIKVVHMHTEKD 463
+ P+ + EA + +KSG VF G AATP PLL +++E + +L IK+ H+H E
Sbjct: 36 KSPKVVSLAEA-TRDIKSGDNVFVHGIAATPTPLLQSLSEHAVANNLNKIKLHHLHLEGA 94
Query: 464 AAYVTPECKDIFRSVSLFMAANVRKSV 544
+ +D RS SLF N+R V
Sbjct: 95 TPWTAEGVRDRIRSNSLFTGHNLRACV 121
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 128 VKLNLNNRMSVITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQP 277
+ ++ RM+ T I P+ + + + +S + + K+ RSY T T++ S+P
Sbjct: 329 IPMSTTRRMTTTT-IRPKTTKKYLSRSTSKYDAKKTTRSYQTTTRTTSKP 377
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 128 VKLNLNNRMSVITKIVPQVSSLHFGKLSSAFLSVKSDRSYFTYTQSLSQP 277
+ ++ RM+ T I P+ + + + +S + + K+ RSY T T++ S+P
Sbjct: 329 IPMSTTRRMTTTT-IRPKTTKKYLSRSTSKYDAKKTTRSYQTTTRTTSKP 377
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +2
Query: 266 LSQPLDRKPEYSTAKEAFEKCLKSGLTVFAQGAAATPVPLLNAMTEVGKSGSLRDIKVVH 445
+ +P DR ++ + E E L + A A+PVP ++ V ++ + + H
Sbjct: 4037 VQEPEDRPENFAESHEKTEATSDENLFESDKYAPASPVPSEDSSNRVIETTTTTTVTREH 4096
Query: 446 MHTEKDAAYV 475
E D +YV
Sbjct: 4097 FEPEDDHSYV 4106
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +2
Query: 266 LSQPLDRKPEYSTAKEAFEKCLKSGLTVFAQGAAATPVPLLNAMTEVGKSGSLRDIKVVH 445
+ +P DR ++ + E E L + A A+PVP ++ V ++ + + H
Sbjct: 4037 VQEPEDRPENFAESHEKTEATSDENLFESDKYAPASPVPSEDSSNRVIETTTTTTVTREH 4096
Query: 446 MHTEKDAAYV 475
E D +YV
Sbjct: 4097 FEPEDDHSYV 4106
>M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical
protein ZK370.3b protein.
Length = 921
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 538 FADVRGHKQRYRSEYVLAFR--GYICRILFGVHMDDFDVSQRSTFSYFGHGIEKRHRRGG 365
F ++G +++RSE+VLA G I + L FD + T +E+ R G
Sbjct: 420 FNKMKGVYEKFRSEHVLALTKLGDIQKQLEASEKSKFDKDEEIT--ALNRKVEEAQREAG 477
Query: 364 RALGE-HGQSG 335
RAL + G +G
Sbjct: 478 RALTKAEGDAG 488
>M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical
protein ZK370.3a protein.
Length = 927
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 538 FADVRGHKQRYRSEYVLAFR--GYICRILFGVHMDDFDVSQRSTFSYFGHGIEKRHRRGG 365
F ++G +++RSE+VLA G I + L FD + T +E+ R G
Sbjct: 420 FNKMKGVYEKFRSEHVLALTKLGDIQKQLEASEKSKFDKDEEIT--ALNRKVEEAQREAG 477
Query: 364 RALGE-HGQSG 335
RAL + G +G
Sbjct: 478 RALTKAEGDAG 488
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 42 YIYWLLGVGARVLSLTTNKIVITTSLCFV 128
+I+W++G G S I I + LCF+
Sbjct: 11 FIFWIIGYGTDYCSYRIVAIEILSGLCFI 39
>AF016421-11|AAM45373.2| 417|Caenorhabditis elegans Hypothetical
protein F44E7.8 protein.
Length = 417
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 191 LHFGKLS----SAFL--SVKSDRSYFTYTQSLSQPLDRKPEYSTAKEAFEKCLKSGLT 346
+HFG LS +AF SV D+ Y S +D+ Y ++KCL+ G+T
Sbjct: 36 VHFGVLSCRACAAFFRRSVVMDKKYSCRKASQGCRIDKSERYLCRLCRYKKCLQLGMT 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,443,040
Number of Sequences: 27780
Number of extensions: 252592
Number of successful extensions: 751
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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