Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15d08
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 46 2e-05
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 38 0.005
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 38 0.005
Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical pr... 30 0.95
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 27 8.8
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 27 8.8
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNS-IIKSV 249
GV + RK + P +EI ++GD S + FKLG+E++E P+ +KSV
Sbjct: 25 GVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETTPDGRTVKSV 84
Query: 250 TTITNDSEMETKSVIPDTGAKCGRHYQFTDEECIVTLTHENASVSGKRYFR 402
N + + I D+ K ++ + + ++T + VS + Y R
Sbjct: 85 VNFENGKFIHIQKKIKDSD-KESIITRWLEGDKLITTLESGSVVSRREYVR 134
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPN 231
GV + RK + P++EI +DG+T S + + FKLGEE+ E P+
Sbjct: 27 GVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENSPD 79
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPN 231
GV + RK S++SP +EI +DGDT S + + FK+ E++ E P+
Sbjct: 27 GVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEIAPD 79
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNS-IIKSV 249
GV + R + + + P +E +++GD T+ ++S + K+KLG +EK + + SV
Sbjct: 27 GVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKTADGRDVSSV 86
Query: 250 TTITND 267
+I ND
Sbjct: 87 FSIEND 92
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNS-IIKSV 249
GV + R + + + P +E +++GD T+ ++S + K+KLG +EK + + SV
Sbjct: 42 GVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKTADGRDVSSV 101
Query: 250 TTITND 267
+I ND
Sbjct: 102 FSIEND 107
>Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical
protein T27F6.2 protein.
Length = 421
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 363 CESHNTFFISKLIVTSTFSSCVRYNRFCLHFTIIGDCCDTFYNGIG 226
CES + +I +L +T T + YN +C F+ + +TF + G
Sbjct: 143 CESQHVAYICELPITYTDNCDFNYNGYCYTFSSTTNSINTFISAQG 188
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 29.1 bits (62), Expect = 2.2
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVT 252
GVP RK+ S P DG NS+ TV + + EE +EK P +
Sbjct: 14 GVPLEARKLPSARIPKKPKETDG------NST--ETVVNSTEKPEERKEKPPKPPKQKQK 65
Query: 253 TITNDSEMETKSVIPDTGAKCGRHYQF-TDEECIVTLTHENA 375
N + K++I DTG + F +EE +TL + A
Sbjct: 66 QKQNLNNKFLKNLITDTGKPASMNGLFVAEEEAKLTLLEKKA 107
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 29.1 bits (62), Expect = 2.2
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVT 252
GVP RK+ S P DG NS+ TV + + EE +EK P +
Sbjct: 14 GVPLEARKLPSARIPKKPKETDG------NST--ETVVNSTEKPEERKEKPPKPPKQKQK 65
Query: 253 TITNDSEMETKSVIPDTGAKCGRHYQF-TDEECIVTLTHENA 375
N + K++I DTG + F +EE +TL + A
Sbjct: 66 QKQNLNNKFLKNLITDTGKPASMNGLFVAEEEAKLTLLEKKA 107
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 29.1 bits (62), Expect = 2.2
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 73 GVPFMGRKMMSMSSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVT 252
GVP RK+ S P DG NS+ TV + + EE +EK P +
Sbjct: 14 GVPLEARKLPSARIPKKPKETDG------NST--ETVVNSTEKPEERKEKPPKPPKQKQK 65
Query: 253 TITNDSEMETKSVIPDTGAKCGRHYQF-TDEECIVTLTHENA 375
N + K++I DTG + F +EE +TL + A
Sbjct: 66 QKQNLNNKFLKNLITDTGKPASMNGLFVAEEEAKLTLLEKKA 107
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 2 PLLSNCFNFSCYNGNCK*FEIIFQVYH 82
P L + + NGNC+ EIIFQV H
Sbjct: 1677 PTLYSSGGIAASNGNCQTDEIIFQVEH 1703
>Z81530-8|CAB04305.2| 329|Caenorhabditis elegans Hypothetical
protein F36D1.3 protein.
Length = 329
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -3
Query: 303 CVRYNRFCLHFTIIGDCCDTFY--NGIGH 223
C R+ +F L T+I CC TF+ +GH
Sbjct: 145 CRRFMKFSLPITVILPCCFTFFMVPAVGH 173
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 2 PLLSNCFNFSCYNGNCK*FEIIFQVYH 82
P L + + NGNC+ EIIFQV H
Sbjct: 1677 PTLYSSGGIAASNGNCQTDEIIFQVEH 1703
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 2 PLLSNCFNFSCYNGNCK*FEIIFQVYH 82
P L + + NGNC+ EIIFQV H
Sbjct: 1677 PTLYSSGGIAASNGNCQTDEIIFQVEH 1703
>Z50044-6|CAA90358.1| 223|Caenorhabditis elegans Hypothetical
protein F22B5.6 protein.
Length = 223
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 336 SKLIVTSTFSSCVRYNRFCLHFTIIGDCCDTFYNG--IGHFLFIFFAKLKFVFYC 178
S +IV F + + R+ + I C F G +GH + I+FAK+ ++ C
Sbjct: 95 SLIIVDILFKTHFTF-RYVVFMNIAVVACGLFVTGYLLGHIVEIWFAKMSTIYSC 148
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 151 TIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVTTITNDSEMETKSVIPD 300
T++ +L+ KF + Y+EK + S TT + E T+ IPD
Sbjct: 500 TLRGEQILQVEVEKF---QPYDEKSDTTTAPSTTTTSTVEETTTELKIPD 546
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 151 TIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVTTITNDSEMETKSVIPD 300
T++ +L+ KF + Y+EK + S TT + E T+ IPD
Sbjct: 500 TLRGEQILQVEVEKF---QPYDEKSDTTTAPSTTTTSTVEETTTELKIPD 546
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 109 SSPLMEISIDGDTMTIKNSSLLRTVEHKFKLGEEYEEKMPNSIIKSVTTITNDSEM 276
S P + IDGD T + RT ++ L E+Y K + ++ V+ T+ + +
Sbjct: 33 SDPSKLLFIDGDRKTTYGEFVKRTGQYATALTEKYNIKKGDRVMARVSKTTDTAAL 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,124,379
Number of Sequences: 27780
Number of extensions: 249950
Number of successful extensions: 566
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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