Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15d06
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-2|AAC48081.1| 356|Caenorhabditis elegans Seven tm recept... 31 0.61
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 30 1.4
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z82288-8|CAB05329.3| 328|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81102-5|CAB03205.3| 328|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 27 10.0
AL110485-30|CAI79250.1| 287|Caenorhabditis elegans Hypothetical... 27 10.0
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 27 10.0
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 27 10.0
>U61953-2|AAC48081.1| 356|Caenorhabditis elegans Seven tm receptor
protein 185 protein.
Length = 356
Score = 31.1 bits (67), Expect = 0.61
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 432 KSIFVFIFSQIYFSIPWSVFCYLRF 358
K I++ F I++ WSV CYL F
Sbjct: 133 KKIYILFFMPIFYGTWWSVLCYLYF 157
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 438 FGCDYWGRILNNDMDVHPSFREIFSSPQREASMFH 542
F CDYWG+ + + H R FS E +F+
Sbjct: 682 FSCDYWGKNIKTVLHSHQYLRHPFSMAVFEDRLFY 716
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 438 FGCDYWGRILNNDMDVHPSFREIFSSPQREASMFH 542
F CDYWG+ + + H R FS E +F+
Sbjct: 684 FSCDYWGKNIKTVLHSHQYLRHPFSMAVFEDRLFY 718
>Z82288-8|CAB05329.3| 328|Caenorhabditis elegans Hypothetical
protein M02B1.1 protein.
Length = 328
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 452 IITAKVPRVFLYLFSPKFIFLYHGVSSVIFDL 357
II + + +FL+ F P F FL G S VIF +
Sbjct: 269 IILSTIGSIFLFDFIPSFTFLL-GASLVIFSI 299
>Z81102-5|CAB03205.3| 328|Caenorhabditis elegans Hypothetical
protein M02B1.1 protein.
Length = 328
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 452 IITAKVPRVFLYLFSPKFIFLYHGVSSVIFDL 357
II + + +FL+ F P F FL G S VIF +
Sbjct: 269 IILSTIGSIFLFDFIPSFTFLL-GASLVIFSI 299
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/64 (18%), Positives = 29/64 (45%)
Frame = +1
Query: 358 KSKITEDTPWYRKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGRQAC 537
K I + RK++ + K K TL V++G + + + + + + + + +C
Sbjct: 724 KRAIKHEHSLKRKVSKAQRKEKRATKTLGVVVGVFLVCWVPFFVINILNAVCILLNKDSC 783
Query: 538 FIGH 549
+G+
Sbjct: 784 QVGY 787
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/64 (18%), Positives = 29/64 (45%)
Frame = +1
Query: 358 KSKITEDTPWYRKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGRQAC 537
K I + RK++ + K K TL V++G + + + + + + + + +C
Sbjct: 589 KRAIKHEHSLKRKVSKAQRKEKRATKTLGVVVGVFLVCWVPFFVINILNAVCILLNKDSC 648
Query: 538 FIGH 549
+G+
Sbjct: 649 QVGY 652
>AL110485-30|CAI79250.1| 287|Caenorhabditis elegans Hypothetical
protein Y46G5A.39 protein.
Length = 287
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +3
Query: 267 VYEHIRCSSICILDV----FRYIRVFNLKRCTRRQIEDNR 374
V +H++ S ICIL +++ +++R +RQ ED R
Sbjct: 20 VLDHLKISDICILRATSRKIKFVLKQSIERAKKRQSEDER 59
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/64 (18%), Positives = 29/64 (45%)
Frame = +1
Query: 358 KSKITEDTPWYRKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGRQAC 537
K I + RK++ + K K TL V++G + + + + + + + + +C
Sbjct: 589 KRAIKHEHSLKRKVSKAQRKEKRATKTLGVVVGVFLVCWVPFFVINILNAVCILLNKDSC 648
Query: 538 FIGH 549
+G+
Sbjct: 649 QVGY 652
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/64 (18%), Positives = 29/64 (45%)
Frame = +1
Query: 358 KSKITEDTPWYRKINLGENKYKNTLGTLAVIIGAGSLTMIWMYTLRSVRYLVLHKGRQAC 537
K I + RK++ + K K TL V++G + + + + + + + + +C
Sbjct: 724 KRAIKHEHSLKRKVSKAQRKEKRATKTLGVVVGVFLVCWVPFFVINILNAVCILLNKDSC 783
Query: 538 FIGH 549
+G+
Sbjct: 784 QVGY 787
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,254,140
Number of Sequences: 27780
Number of extensions: 285637
Number of successful extensions: 768
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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