Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt15d04
(596 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0242 + 15700336-15700401,15700481-15700649,15701828-15702024 30 1.6
06_01_0367 - 2636487-2636498,2636655-2636724,2636831-2636937,263... 30 1.6
12_02_0492 + 19668896-19669893,19670886-19670972,19671067-19671097 29 2.8
06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833... 29 2.8
02_01_0680 + 5054306-5056411,5057200-5057243,5057549-5057664,505... 29 2.8
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 3.7
08_02_0800 + 21330446-21330722,21331040-21331182,21331925-213319... 27 8.6
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 27 8.6
05_07_0065 + 27446138-27446296,27446736-27447138,27448144-274484... 27 8.6
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 27 8.6
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 27 8.6
>07_03_0242 + 15700336-15700401,15700481-15700649,15701828-15702024
Length = 143
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 307 IYGIYIVSKSGGLIYNYDH 363
IY ++I++KSGGLIY D+
Sbjct: 6 IYSLFIINKSGGLIYYKDY 24
>06_01_0367 -
2636487-2636498,2636655-2636724,2636831-2636937,
2637208-2637226,2637383-2637470,2638175-2638303,
2638428-2638506,2639658-2639720,2640437-2640535,
2641583-2641740,2642926-2643094,2643174-2643239
Length = 352
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 307 IYGIYIVSKSGGLIYNYDH 363
IY ++I++KSGGLIY D+
Sbjct: 6 IYSLFIINKSGGLIYYKDY 24
>12_02_0492 + 19668896-19669893,19670886-19670972,19671067-19671097
Length = 371
Score = 29.1 bits (62), Expect = 2.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3
Query: 534 VFRCSSCHWRSIY 496
+FRCS+CHW +Y
Sbjct: 248 LFRCSTCHWSRVY 260
>06_03_1318 -
29282562-29282566,29282727-29282810,29282913-29283380,
29283735-29283917,29284362-29284467,29284627-29284651,
29284736-29284855,29284920-29284997,29285646-29285774,
29285976-29285989,29286168-29287944,29288344-29288489,
29288921-29291029
Length = 1747
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 487 IHVQHLFHLFGQMPQQLFYFHTAI 416
+H+++ HLF +MP F F TA+
Sbjct: 51 LHLRYALHLFDRMPASTFLFDTAL 74
>02_01_0680 +
5054306-5056411,5057200-5057243,5057549-5057664,
5057942-5058036
Length = 786
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 487 IHVQHLFHLFGQMPQQLFYFHTAI 416
+H+++ HLF +MP F F TA+
Sbjct: 51 LHLRYALHLFDRMPPSTFLFDTAL 74
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -1
Query: 518 PVTGDPF----TDSNTCPTFIPSLWPNATTTFLFSYCNLISRGNPNV 390
PV G PF + SNT T + S +P +Y N++++ PN+
Sbjct: 175 PVMGSPFPVFFSASNTAATVVTSTFPPTLPAVSSAYPNMVNQTMPNM 221
>08_02_0800 +
21330446-21330722,21331040-21331182,21331925-21331978,
21332065-21332130,21333075-21333096,21333347-21333460,
21334153-21334278,21334891-21334925,21335709-21335809,
21335911-21335971,21336482-21336572,21337657-21337842,
21338755-21338922,21339006-21339208,21339313-21339431,
21339910-21339928,21340092-21340130,21340238-21340465,
21340987-21341088,21341842-21341889,21343622-21343765,
21343873-21343968,21344224-21344325,21345188-21345274
Length = 876
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 328 SKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRDGINVGHVLLSV 498
SK+ G++ + + +E + G D ++ Y K +V AFG G VLL +
Sbjct: 86 SKNPGIVGDASIDATAIENAASIGLDDDNRVIYSKKLIVSAFGAVLGCRFSLVLLEL 142
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/30 (26%), Positives = 21/30 (70%)
Frame = +1
Query: 265 CVENTTIKEDNKMVIYGIYIVSKSGGLIYN 354
CV T+++ED +++ G+++V + G +++
Sbjct: 143 CVGGTSVREDQRILASGVHVVVGTPGRVFD 172
>05_07_0065 +
27446138-27446296,27446736-27447138,27448144-27448430,
27448550-27448810
Length = 369
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 286 KEDNKMVIYGIYIVSKSGGLIYNYDHNIPRVETEKTFGFPLDIKLQYENKKVVVAFGQRD 465
K K+V+ ++VS S N+DH + + F L + ++ +++AFG
Sbjct: 111 KTSGKVVVNRGFLVSNSN----NHDHTVVVQQARIYLAFQLQFSYRLTHQHIILAFGSSI 166
Query: 466 GIN 474
+N
Sbjct: 167 PVN 169
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 251 LNVIVKSTKLVHKLILVISRKLLENITRNINSRTYLNFLSYIYSLFLID 105
LNV+ KS+ + LV+ ++LL+ N +S FLS++ F ++
Sbjct: 867 LNVLQKSSTALQHYGLVVLQQLLKGSITNRSSCFKAGFLSFLLDWFSVE 915
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/30 (26%), Positives = 21/30 (70%)
Frame = +1
Query: 265 CVENTTIKEDNKMVIYGIYIVSKSGGLIYN 354
CV T+++ED +++ G+++V + G +++
Sbjct: 143 CVGGTSVREDQRILASGVHVVVGTPGRVFD 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,584,453
Number of Sequences: 37544
Number of extensions: 248160
Number of successful extensions: 640
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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