Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt15b14
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.70 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.70 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.8  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   3.7  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   3.7  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 102 FLHTEDFLEAIAEQLERKLGGK*KHTITYKQHPVAEHWYPGRDSVVAS 245
           ++H +       E+L  +LG + K  I + + P+ E ++P  DS+VAS
Sbjct: 236 YMHQQIMARYNCERLCNRLG-RVKRFINWHE-PIPEAYFPKLDSLVAS 281


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 69  IHGLA-NTKEGMFLHTEDFLEAIAEQLER 152
           IHG    +KE + LH +DFLE     + R
Sbjct: 54  IHGTEPRSKEEILLHAKDFLEQYFSSIRR 82


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 420 AXSTTGSKTRPTEKIRRETQ 479
           A  TTG+ T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 195 VVYR*LCVFICRPTCV 148
           VV + LC+ IC P CV
Sbjct: 57  VVPKPLCIKICAPGCV 72


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 195 VVYR*LCVFICRPTCV 148
           VV + LC+ IC P CV
Sbjct: 57  VVPKPLCIKICAPGCV 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,441
Number of Sequences: 438
Number of extensions: 3909
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)