Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14o22
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    25   0.60 
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    25   0.79 
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   4.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   4.2  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   4.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.6  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   7.4  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    21   7.4  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    21   9.8  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -2

Query: 403 AGYDLSRVRQLWDTSENEQKRK 338
           AG+DLS ++ +++++  EQ +K
Sbjct: 30  AGFDLSDLKSMYESNSEEQMKK 51


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 403 AGYDLSRVRQLWDTSENEQKRK 338
           AG+DLS ++ +++ +  EQ +K
Sbjct: 30  AGFDLSDLKSMYEANSEEQMKK 51


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 357 KTNKREKKNHKNLGNTAKY 301
           ++ +REKK++KN  +  KY
Sbjct: 41  RSREREKKSYKNENSYRKY 59


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 357 KTNKREKKNHKNLGNTAKY 301
           ++ +REKK++KN  +  KY
Sbjct: 41  RSREREKKSYKNENSYRKY 59


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 357 KTNKREKKNHKNLGNTAKY 301
           ++ +REKK++KN  +  KY
Sbjct: 41  RSREREKKSYKNENSYRKY 59


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 357 KTNKREKKNHKNLGNTAKY 301
           ++ +REKK++KN  +  KY
Sbjct: 41  RSREREKKSYKNENSYRKY 59


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 357 KTNKREKKNHKNLGNTAKY 301
           ++ +REKK++KN  +  KY
Sbjct: 274 RSREREKKSYKNENSYRKY 292


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 359 GGIPQLPNTTK 391
           GG+PQL N TK
Sbjct: 108 GGVPQLGNLTK 118


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 425 PRRKNGCDTH 454
           PRRKN C  H
Sbjct: 341 PRRKNNCPLH 350


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 361 SENEQKRKEKPQKLRQHS*VHEPVLPLHSRRQRNSQK 251
           S+NEQ+RKE  Q   +     E    + S++Q+  Q+
Sbjct: 60  SKNEQQRKEMEQMREREREQREHSDRVTSQQQQQQQQ 96


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 69  CQSESGHGTCGR 104
           C  E GH  CGR
Sbjct: 117 CMLELGHEVCGR 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,141
Number of Sequences: 438
Number of extensions: 2531
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)