Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14o11
(690 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 25 0.51
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 25 0.90
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 3.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 6.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 6.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 6.3
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.4 bits (53), Expect = 0.51
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 441 RKDDMLHLYSSFSSFIGEIPLNLNINNAKYMSFGGDLKKITELKFEFV 584
R D + HL+ S + + E PL N+N + + S L K +E V
Sbjct: 228 RIDAVPHLFESANISLDEPPLGKNLNLSLHASLNHTLTKDQPETYELV 275
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 368 NSISYLTN--CHIFFTIRKFHINFTDDISIIRCLDSSYQRN 252
N YLTN C I + K HI D+I + + ++ + ++N
Sbjct: 67 NIKKYLTNYSCFITCALEKSHIIQNDEIQLDKLVEMANRKN 107
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.6 bits (46), Expect = 3.6
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = -3
Query: 601 KHSNFQTNSNFNSVIFFKS 545
K+SN+ +N+N +++K+
Sbjct: 90 KYSNYNNYNNYNKKLYYKN 108
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 521 CKIHVIWWRFEKNH 562
CKI + W+ F+ H
Sbjct: 111 CKIDIAWFPFDDQH 124
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 521 CKIHVIWWRFEKNH 562
CKI + W+ F+ H
Sbjct: 111 CKIDITWFPFDDQH 124
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 521 CKIHVIWWRFEKNH 562
CKI + W+ F+ H
Sbjct: 111 CKIDIAWFPFDDQH 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 521 CKIHVIWWRFEKNH 562
CKI + W+ F+ H
Sbjct: 111 CKIDITWFPFDDQH 124
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 521 CKIHVIWWRFEKNH 562
CKI + W+ F+ H
Sbjct: 179 CKIDITWFPFDDQH 192
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 521 CKIHVIWWRFEKNH 562
CKI + W+ F+ H
Sbjct: 179 CKIDITWFPFDDQH 192
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 399 EVLNGSDVKIQFRARKDDMLHLYSSFSS 482
E+ +G+ +++ D+LHL+ S+S+
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 399 EVLNGSDVKIQFRARKDDMLHLYSSFSS 482
E+ +G+ +++ D+LHL+ S+S+
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 399 EVLNGSDVKIQFRARKDDMLHLYSSFSS 482
E+ +G+ +++ D+LHL+ S+S+
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGSWSN 676
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,077
Number of Sequences: 438
Number of extensions: 4171
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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