Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14o08
(504 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_2813| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40) 36 0.019
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.058
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 31 0.41
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16) 31 0.71
SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16) 30 1.2
SB_34471| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17) 29 2.9
SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 3.8
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 28 3.8
SB_56832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 27 8.8
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 27 8.8
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 27 8.8
>SB_29076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 385 MARALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGWXLC 504
+A+ALYDNIA+S DEL FR+GD++TVLE++ G GW LC
Sbjct: 3 LAKALYDNIADSADELTFRKGDVITVLEKDIDGLFGWWLC 42
>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 382 CMARALYDNIAESPDELAFRRGDLLTVLEQNTGG 483
CM RALYD A S +EL+F GD + V +Q+ G
Sbjct: 562 CMVRALYDYEAMSDEELSFNEGDTIYVTKQDDHG 595
>SB_2813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1362
Score = 35.9 bits (79), Expect = 0.019
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 352 LGRETVLPTQCMARALYDNIAESPDELAFRRGDLLTVL 465
L E + + A AL+D++ P+EL FR GD++TV+
Sbjct: 854 LTEEDMEVPEAFAEALWDHVTMDPEELTFRAGDVITVI 891
>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
Length = 313
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 343 SIPLGRETVLPTQCMARALYDNIAESPDELAFRRGDLLTVLEQ 471
SIPL + C +ALYD E+PD+L F +GD++ + E+
Sbjct: 265 SIPLANTVISGPSC--KALYDYPGEAPDDLTFYQGDVIRLKER 305
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 34.3 bits (75), Expect = 0.058
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 IPLGRETVLPTQC-MARALYDNIAESPDELAFRRGDLLTVLEQNTGG 483
IPL E LP + + ALYD A + ++L+F++G+ L V+ GG
Sbjct: 49 IPLSTELTLPAERKLFVALYDYEARTDEDLSFKKGEKLEVVNDLDGG 95
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 33.9 bits (74), Expect = 0.077
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +1
Query: 391 RALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
RA+YD + + P+ L+F++GD++ ++++ EGW
Sbjct: 1517 RAMYDYVTQEPNLLSFKKGDVIQIIDK-PDIEEGW 1550
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 349 PLGRETVLPTQCMARA--LYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
P +E P + + RA YD ++ DEL + GD++T++++ + GW
Sbjct: 204 PQPQEAQAPAKRVLRAKVTYDYEQQNEDELELKVGDIITIVKKEVFDTPGW 254
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 31.1 bits (67), Expect = 0.54
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 388 ARALYDNIAESPDELAFRRGDLLTVLEQ 471
A ALYD A S EL+F++GD++ V ++
Sbjct: 720 AAALYDYSARSSKELSFKKGDIIRVFKR 747
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 30.7 bits (66), Expect = 0.71
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 382 CMARALYDNIAESPDELAFRRGDLLTVLEQNTGG 483
C +A+YD A DEL GD++TV + G
Sbjct: 563 CQCKAIYDYQATQSDELTIHPGDIITVTARLDNG 596
>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
Length = 299
Score = 30.7 bits (66), Expect = 0.71
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 394 ALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
ALYD A DEL+F+ G+++T L + +GW
Sbjct: 248 ALYDYEAAEDDELSFKAGEIVTKLSER--DDQGW 279
>SB_42698| Best HMM Match : SH3_1 (HMM E-Value=5.2e-16)
Length = 505
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 388 ARALYDNIAESPDELAFRRGDLLTVLEQ 471
A+AL D DEL FR+ D++T++ Q
Sbjct: 122 AKALLDFERHDDDELGFRKNDIITIISQ 149
>SB_34471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 220 FCCAKRRGVGIRRARGS 270
FC RRG+G RR+RGS
Sbjct: 238 FCLGARRGIGRRRSRGS 254
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 391 RALYDNIAESPDELAFRRGDLLTV 462
+ALYD A++ DEL+F GD++ V
Sbjct: 831 QALYDCEADNDDELSFMEGDVILV 854
>SB_9732| Best HMM Match : SH3_1 (HMM E-Value=2e-17)
Length = 1860
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 391 RALYDNIAESPDELAFRRGDLLTVLEQ-NTGGSEGWXLC 504
+A+++ + PDELA GD++ VL + G G LC
Sbjct: 937 QAIHNYTPQQPDELALHEGDVINVLRKLPDGWYHGERLC 975
>SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 361 ETVLPTQCMARALYDNIAESPDELAFRRGDLLTVLEQN--TGGSEGW 495
+ +L + ALYD A DEL+F+ + + +L ++ G E W
Sbjct: 13 QAILSRSDLCIALYDYEAAEEDELSFKANECIELLSKDPEISGDEDW 59
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 391 RALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
+A +D A+ DEL F RGDL+ + E+ S+ W
Sbjct: 351 QAKWDVKADDEDELEFSRGDLIYIYEK--ANSDWW 383
>SB_56832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +1
Query: 391 RALYDNI---AESPDELAFRRGDLLTVLEQNTGGSEG 492
R YD + AE P FRR + +E+NTG +G
Sbjct: 129 RKKYDGVEYLAEPPKGYCFRRTGICRAIEKNTGTEDG 165
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 391 RALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
R LY +PDE+ D++TV N GW
Sbjct: 17 RVLYAFEPRNPDEIEVNEDDIVTVDHDNCTAPPGW 51
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 388 ARALYD--NIAESPDELAFRRGDLLTVLEQNTGG 483
A+AL D N+ + P L+F+ GD++ ++EQN G
Sbjct: 274 AKALRDYCNVYD-PTCLSFKTGDVIEIIEQNESG 306
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 376 TQCMARALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
T C+ +A + DEL +GDL+ VLE+ +GW
Sbjct: 203 TLCIVKAKFSYQPIHVDELQLTKGDLIHVLEKE---GDGW 239
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 379 QCMARALYDNIAESPDELAFRRGDLLTVLEQNTGGSEGW 495
+C+ ALYD ++ E++ ++GD+LT+L N+ + W
Sbjct: 851 ECVV-ALYDYQEKTAREVSMKKGDILTLL--NSTNKDWW 886
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,425,824
Number of Sequences: 59808
Number of extensions: 251806
Number of successful extensions: 779
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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