Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14j22
         (639 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013902-1|AAH13902.1|  486|Homo sapiens FAD-dependent oxidoredu...    72   2e-12
AF103801-1|AAF02421.1|  486|Homo sapiens unknown protein.              72   2e-12
BC002910-1|AAH02910.2|  367|Homo sapiens FOXRED1 protein protein.      35   0.28 
AK097987-1|BAC05210.1|  132|Homo sapiens protein ( Homo sapiens ...    30   6.0  

>BC013902-1|AAH13902.1|  486|Homo sapiens FAD-dependent
           oxidoreductase domain containing 1 protein.
          Length = 486

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
 Frame = +3

Query: 351 PENTDIVXXXXXXXXAATAYWLKR---RAGDGLSVVVIEKDFSYKQAQRHLQHGTLSQHF 521
           PE++D+V         + AYWLK+   R G  + V+V+E+D +Y QA   L  G + Q F
Sbjct: 61  PEHSDVVIVGGGVLGLSVAYWLKKLESRRG-AIRVLVVERDHTYSQASTGLSVGGICQQF 119

Query: 522 TLPENLFLSQFSAFFLRNIREHL 590
           +LPEN+ LS FSA FLRNI E+L
Sbjct: 120 SLPENIQLSLFSASFLRNINEYL 142


>AF103801-1|AAF02421.1|  486|Homo sapiens unknown protein.
          Length = 486

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
 Frame = +3

Query: 351 PENTDIVXXXXXXXXAATAYWLKR---RAGDGLSVVVIEKDFSYKQAQRHLQHGTLSQHF 521
           PE++D+V         + AYWLK+   R G  + V+V+E+D +Y QA   L  G + Q F
Sbjct: 61  PEHSDVVIVGGGVLGLSVAYWLKKLESRRG-AIRVLVVERDHTYSQASTGLSVGGICQQF 119

Query: 522 TLPENLFLSQFSAFFLRNIREHL 590
           +LPEN+ LS FSA FLRNI E+L
Sbjct: 120 SLPENIQLSLFSASFLRNINEYL 142


>BC002910-1|AAH02910.2|  367|Homo sapiens FOXRED1 protein protein.
          Length = 367

 Score = 34.7 bits (76), Expect = 0.28
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +3

Query: 522 TLPENLFLSQFSAFFLRNIREHL 590
           +LPEN+ LS FSA FLRNI E+L
Sbjct: 1   SLPENIQLSLFSASFLRNINEYL 23


>AK097987-1|BAC05210.1|  132|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40668 fis, clone THYMU2020830. ).
          Length = 132

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = -3

Query: 214 IFFLYFDVVLI*CMFTIVYVLVKSVF 137
           IFFLYF+++ + C+F IV+ ++  ++
Sbjct: 107 IFFLYFNLIPLKCLFFIVFFIIYIIY 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,921,540
Number of Sequences: 237096
Number of extensions: 1441809
Number of successful extensions: 2306
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)