Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14j04
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.7  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   4.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 550 VIMCILSGVNIFAWLNKPQPAWWSW 624
           VI  +L  + IF  +   +PAWW W
Sbjct: 10  VIAAVLLTILIF--VTSHRPAWWFW 32


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 510 VKTRWVIVSSNDRNLWVFLLYNSCIVF 430
           VKTR +  + N+     F +Y +CI++
Sbjct: 693 VKTRKIPENFNESKFIGFTMYTTCIIW 719


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 510 VKTRWVIVSSNDRNLWVFLLYNSCIVF 430
           VKTR +  + N+     F +Y +CI++
Sbjct: 783 VKTRKIPENFNESKFIGFTMYTTCIIW 809


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 137 KIENIRPPKNKYSV 178
           KI+ I PP+ KYSV
Sbjct: 101 KIKIIAPPEKKYSV 114


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 525 NYWFWQNVGHHVYTQRCEYF 584
           NY  W    H+V  QR  YF
Sbjct: 203 NYTGWYLTKHNVPEQRLNYF 222


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 525 NYWFWQNVGHHVYTQRCEYF 584
           NY  W    H+V  QR  YF
Sbjct: 203 NYTGWYLTKHNVPEQRLNYF 222


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
 Frame = +3

Query: 6   ITFSLIIKKCHLKNKIKEALK-----------QWFLKFLKPISIDLYFVLFLFITKLKTF 152
           +TF+ +  +C  K  I+EALK             F    +P SIDL  V   F   L+  
Sbjct: 138 VTFANLGIQCVKKKDIEEALKIREEIRVDPFRTGFEHKRQPTSIDLNAVRLCFQVFLEGS 197

Query: 153 GRLKINIP 176
            + K N+P
Sbjct: 198 QKRKFNVP 205


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
 Frame = +3

Query: 6   ITFSLIIKKCHLKNKIKEALK-----------QWFLKFLKPISIDLYFVLFLFITKLKTF 152
           +TF+ +  +C  K  I+EALK             F    +P SIDL  V   F   L+  
Sbjct: 138 VTFANLGIQCVKKKDIEEALKIREEIRVDPFRTGFEHKRQPTSIDLNAVRLCFQVFLEGS 197

Query: 153 GRLKINIP 176
            + K N+P
Sbjct: 198 QKRKFNVP 205


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 436 YAGIIQQKYPEISVIGANYD 495
           Y G+  +KYP+   +G  +D
Sbjct: 627 YCGLRDRKYPDARAMGYPFD 646


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,714
Number of Sequences: 438
Number of extensions: 4887
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)