Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14h14
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.8  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 105 IRVPVCARAGSTGNTELAKIGDREWVGYGFNGQPN 209
           +  P  A   +T + ++ K+    WV +  NG PN
Sbjct: 472 VDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPN 506


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 105 IRVPVCARAGSTGNTELAKIGDREWVGYGFNGQPN 209
           +  P  A   +T + ++ K+    WV +  NG PN
Sbjct: 472 VDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPN 506


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 623 SPVQYQIYFPAVVFVVPLGGKSIDGIHLKVQHSL 522
           SP++Y++Y PA++   P         H+  Q S+
Sbjct: 422 SPMEYRLYNPALIQSQPSPQYPSTSSHILQQPSI 455


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,291
Number of Sequences: 438
Number of extensions: 4247
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)