Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14g01
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456811-1|CAG33092.1| 360|Homo sapiens RNUT1 protein. 106 1e-22
BC004203-1|AAH04203.1| 360|Homo sapiens snurportin 1 protein. 106 1e-22
AF039029-1|AAC70906.1| 360|Homo sapiens snurportin1 protein. 106 1e-22
BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding prote... 31 4.7
BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing bi... 31 4.7
AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding prote... 31 4.7
AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein ... 31 4.7
>CR456811-1|CAG33092.1| 360|Homo sapiens RNUT1 protein.
Length = 360
Score = 106 bits (254), Expect = 1e-22
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Frame = +1
Query: 184 MDDIIQKIASTAIHFEDKDASKTMFKDL--YKNREKSNNQEERRKKMLEVQKCNRNATTD 357
M+++ Q +AS+ +D +++ L YK++ S Q ERR+++LE+QK R
Sbjct: 1 MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKR----- 55
Query: 358 TFRGILDIVNSVD--TTEDYFGSTTQTYYRPN---IYVAGFVKAPSSYYNVLMISEWMVE 522
LD VN +D+ G ++ + + + + K P Y N LM+SEW+++
Sbjct: 56 -----LDYVNHARRLAEDDWTGMESEEENKKDDEEMDIDTVKKLPKHYANQLMLSEWLID 110
Query: 523 KPSDFAQNWYVVPCPKGSRVLIVANNGRTKLYNKYGRFRLDTKTLLPGGHPNKGYQKTDC 702
PSD Q W VV CP G R LIVA+ G T Y K G +LLPGG+ K D
Sbjct: 111 VPSDLGQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRNSTAK-DY 169
Query: 703 CVLDGFYDSLSNSVYIXDLLAWNNQAXTD 789
+LD Y+ ++ + Y+ D++ W D
Sbjct: 170 TILDCIYNEVNQTYYVLDVMCWRGHPFYD 198
>BC004203-1|AAH04203.1| 360|Homo sapiens snurportin 1 protein.
Length = 360
Score = 106 bits (254), Expect = 1e-22
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Frame = +1
Query: 184 MDDIIQKIASTAIHFEDKDASKTMFKDL--YKNREKSNNQEERRKKMLEVQKCNRNATTD 357
M+++ Q +AS+ +D +++ L YK++ S Q ERR+++LE+QK R
Sbjct: 1 MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKR----- 55
Query: 358 TFRGILDIVNSVD--TTEDYFGSTTQTYYRPN---IYVAGFVKAPSSYYNVLMISEWMVE 522
LD VN +D+ G ++ + + + + K P Y N LM+SEW+++
Sbjct: 56 -----LDYVNHARRLAEDDWTGMESEEENKKDDEEMDIDTVKKLPKHYANQLMLSEWLID 110
Query: 523 KPSDFAQNWYVVPCPKGSRVLIVANNGRTKLYNKYGRFRLDTKTLLPGGHPNKGYQKTDC 702
PSD Q W VV CP G R LIVA+ G T Y K G +LLPGG+ K D
Sbjct: 111 VPSDLGQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRNSTAK-DY 169
Query: 703 CVLDGFYDSLSNSVYIXDLLAWNNQAXTD 789
+LD Y+ ++ + Y+ D++ W D
Sbjct: 170 TILDCIYNEVNQTYYVLDVMCWRGHPFYD 198
>AF039029-1|AAC70906.1| 360|Homo sapiens snurportin1 protein.
Length = 360
Score = 106 bits (254), Expect = 1e-22
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Frame = +1
Query: 184 MDDIIQKIASTAIHFEDKDASKTMFKDL--YKNREKSNNQEERRKKMLEVQKCNRNATTD 357
M+++ Q +AS+ +D +++ L YK++ S Q ERR+++LE+QK R
Sbjct: 1 MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKR----- 55
Query: 358 TFRGILDIVNSVD--TTEDYFGSTTQTYYRPN---IYVAGFVKAPSSYYNVLMISEWMVE 522
LD VN +D+ G ++ + + + + K P Y N LM+SEW+++
Sbjct: 56 -----LDYVNHARRLAEDDWTGMESEEENKKDDEEMDIDTVKKLPKHYANQLMLSEWLID 110
Query: 523 KPSDFAQNWYVVPCPKGSRVLIVANNGRTKLYNKYGRFRLDTKTLLPGGHPNKGYQKTDC 702
PSD Q W VV CP G R LIVA+ G T Y K G +LLPGG+ K D
Sbjct: 111 VPSDLGQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRNSTAK-DY 169
Query: 703 CVLDGFYDSLSNSVYIXDLLAWNNQAXTD 789
+LD Y+ ++ + Y+ D++ W D
Sbjct: 170 TILDCIYNEVNQTYYVLDVMCWRGHPFYD 198
>BC108310-1|AAI08311.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +1
Query: 274 NREKSNNQEERRKKMLEVQKCNRNATTDTFRGILDIVNSV---DTTEDYFGSTTQTYYRP 444
N++K ++++RKK + T++ + D+++ + E + G +T +
Sbjct: 108 NQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVK- 166
Query: 445 NIYVAGFVKAPSSYYNVLMISEWMVEKPSDFAQNWYVVPCPK 570
++V G + +YY E EKP DF + +P K
Sbjct: 167 TVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSK 208
>BC104879-1|AAI04880.1| 376|Homo sapiens WW domain-containing
binding protein 4 protein.
Length = 376
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +1
Query: 274 NREKSNNQEERRKKMLEVQKCNRNATTDTFRGILDIVNSV---DTTEDYFGSTTQTYYRP 444
N++K ++++RKK + T++ + D+++ + E + G +T +
Sbjct: 108 NQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVK- 166
Query: 445 NIYVAGFVKAPSSYYNVLMISEWMVEKPSDFAQNWYVVPCPK 570
++V G + +YY E EKP DF + +P K
Sbjct: 167 TVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSK 208
>AL157877-5|CAI13223.1| 376|Homo sapiens WW domain binding protein
4 (formin binding protein 21) protein.
Length = 376
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +1
Query: 274 NREKSNNQEERRKKMLEVQKCNRNATTDTFRGILDIVNSV---DTTEDYFGSTTQTYYRP 444
N++K ++++RKK + T++ + D+++ + E + G +T +
Sbjct: 108 NQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVK- 166
Query: 445 NIYVAGFVKAPSSYYNVLMISEWMVEKPSDFAQNWYVVPCPK 570
++V G + +YY E EKP DF + +P K
Sbjct: 167 TVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSK 208
>AF071185-1|AAC34811.1| 376|Homo sapiens formin binding protein 21
protein.
Length = 376
Score = 31.1 bits (67), Expect = 4.7
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +1
Query: 274 NREKSNNQEERRKKMLEVQKCNRNATTDTFRGILDIVNSV---DTTEDYFGSTTQTYYRP 444
N++K ++++RKK + T++ + D+++ + E + G +T +
Sbjct: 108 NQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVK- 166
Query: 445 NIYVAGFVKAPSSYYNVLMISEWMVEKPSDFAQNWYVVPCPK 570
++V G + +YY E EKP DF + +P K
Sbjct: 167 TVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSK 208
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,730,730
Number of Sequences: 237096
Number of extensions: 2314019
Number of successful extensions: 4419
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4407
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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