Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14g01
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   3.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.7  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    22   7.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.9  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 293 TKKRDEKKCWKFKSVTAMLPQTHL 364
           T + ++K  W F+S   +LP  +L
Sbjct: 237 TMQENDKMSWLFESEDVLLPSVYL 260


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +3

Query: 99  KQLKNCVNKFVFHW*LKITSGYDLQFSKNG*YYTKNS 209
           K   NC  +  +H+ +   S  +   +KNG +++++S
Sbjct: 217 KNFDNCDQRINYHFGMTDNSRLEPGTNKNGKFFSRSS 253



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 568  KGSRVLIVANNGRTKLYNKYGRFRLDTKT 654
            KG+R +I  +N    L    G FRL+ +T
Sbjct: 1057 KGTRPMIPDDNTSLALPKNEGPFRLNVET 1085


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 269 TKIEKRVITKKRDEKKCWKFKS 334
           T+ E+ V+ KKR +K   K+K+
Sbjct: 130 TEAEEEVLNKKRSKKAEAKYKA 151


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 550 TNSEQNQRVFLPSIQKSSIH 491
           +NS+       PSI +SSIH
Sbjct: 48  SNSDSLSMTIPPSIDRSSIH 67


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -1

Query: 745 KHYSIENHKNHLE 707
           +H+ ++NH +HL+
Sbjct: 140 RHHHLQNHHHHLQ 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,492
Number of Sequences: 438
Number of extensions: 5099
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)