Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14f24
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 31 0.15
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 1.8
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 27 2.4
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 27 2.4
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 27 3.2
SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription te... 27 3.2
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 27 3.2
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 26 4.2
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 26 4.2
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 5.6
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 25 7.4
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 25 9.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.7
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 25 9.7
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 31.1 bits (67), Expect = 0.15
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = -1
Query: 416 LQSEVVVSGNELDEVSGHDESKVKGEVLSNNVLSVADPELVAVLHGVPSLVNDQVVDYIL 237
L ++V+ G++ +V HD E LS S P+L HGV + VN V DYI
Sbjct: 176 LDKQIVLLGDDTWDVLFHD---YLNETLSQPAFSFNVPDL----HGVDNKVNQYVFDYIK 228
Query: 236 D 234
D
Sbjct: 229 D 229
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -1
Query: 437 GIGCGTELQSEVVVSGNELDEVSGHDESKVKGEVLSNNVLSVADPELVAVLHGVPSLVN 261
G CG + VV LD V G DE+ G+ LS + DP + ++H + S +N
Sbjct: 1113 GHSCGVIKEYSTVVVMGSLDGVEGSDETVSGGQRLSLDRPPTNDPASL-MIHQLISCMN 1170
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 111 DVNLASNQELEEKLYNSVLAGNYDSAVAQSLEHE 212
+VN+ S+ ELEE + A NY+ + HE
Sbjct: 10 EVNMDSSMELEESSQEPLRADNYEEIYNSLVHHE 43
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 314 VADPELVAVLHGVPSLVNDQVVDYILDDG 228
V D V + H +PS+V D DYI +G
Sbjct: 239 VYDSPWVDLTHSLPSVVADDAADYIPSEG 267
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -1
Query: 425 GTELQSEVVVSGNELDEVSGHDESKVKGEVLSNNVLSVADPELVAVLHGVPSLVNDQV 252
G E++S + N+++E + ++ EVLS N + E V + +PS+ Q+
Sbjct: 477 GVEIKSNLEAKSNDVEEYDAFYKDEINCEVLSWNEQNPKASEERVVGYSLPSVNLQQI 534
>SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription
termination factor Reb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 504
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/38 (23%), Positives = 21/38 (55%)
Frame = +3
Query: 228 SIIQNVVDDLIIDKRRNTMEYCYKLWVGNGQHIVRKYF 341
+II V + I+D+ + ++C ++W G +R ++
Sbjct: 247 AIISQEVHNFIMDQGWSEYQFCNQIWAGKCPKTIRMFY 284
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 26.6 bits (56), Expect = 3.2
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +3
Query: 108 MDVNLASNQELEEKLYNSVLAGNYDSAVAQSLEHEKQNRGSIIQNVVDDLIIDKRRNTME 287
+DVN+ ++ + LY+ +A + + + LE R +Q ++ I +N
Sbjct: 314 LDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPLQAMIPS--ISNTKNAES 371
Query: 288 YCYKLWVGNGQHIVR-KYFPFNFRLIMAGNFVKLISRNYNLALKLGSTTNPSNERLAFGD 464
K ++VR + + +++ NF++ S NY+ + + + ++ + A D
Sbjct: 372 SSQKAVRTYENYLVRTDPRERSIKSMLSDNFLQRSSNNYDNEI-IEKVDSANSNKNATND 430
Query: 465 GADKQTE 485
D QTE
Sbjct: 431 IKDLQTE 437
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 492 SWKFITLWENNRVYFKVHNTKYNQYL-KMSSKTDCNNRDRLVYGGNTAD 635
+WK I+L E R+++ QYL K SS D NRD V+ +D
Sbjct: 538 TWKSISLVERARIHYLTAFKPPKQYLPKCSSPKD--NRDLKVFADYGSD 584
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 427 QPIPRTKDLHSAMVQTSRLNSSVGSSLPCGRTTE 528
Q + KD+ SA + +NSS SS C T+
Sbjct: 108 QQTEKEKDVDSASAENESINSSSSSSKECSTQTQ 141
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 365 HDESKVKGEVLSNNVLSVADPELVAVLHGVPSL 267
HD S+ + + N++LSV DP + H VPS+
Sbjct: 516 HDLSRGNRDKIRNSILSVYDPNVSQ--HRVPSI 546
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 25.4 bits (53), Expect = 7.4
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -1
Query: 500 LPTDEFSLLVCTIAECKSFVRGIGCGTELQS-EVVVS-GNELDEVSGHDESKVKGEVLSN 327
LP DEF LL IAE F + + E++V GN + + S + GE +
Sbjct: 724 LPNDEFHLLPSAIAEVVLFSKHHDDDLRAMAFELLVEVGNRMKNGGKINMSLIDGEEPNK 783
Query: 326 NVLSVADPELVAVLHGVPSLVNDQV 252
V+ E ++++ +L+ND +
Sbjct: 784 TVVEANINEYISMISA--NLMNDSL 806
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/49 (16%), Positives = 27/49 (55%)
Frame = +3
Query: 192 AQSLEHEKQNRGSIIQNVVDDLIIDKRRNTMEYCYKLWVGNGQHIVRKY 338
+Q + +++ ++ + DD+++D+ ++ + Y W G+ +++ Y
Sbjct: 347 SQPIPESQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTY 395
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 9.7
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = -2
Query: 316 PLPTQSL*QYSMVFRLLSMIRSSTTFWMMEPLFCFSCSKL*ATALS*LPARTLLYSFSSS 137
P+P+ S + L ++ SS + M S +T ++ + TLL S +SS
Sbjct: 698 PIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTLITASSSNTLLSSITSS 757
Query: 136 SWLEARFTSMIISTTLALAASTHIANTTRS 47
S + + T IS+ L A ++ + T S
Sbjct: 758 SAIVSSTTVSNISSNLPSATASSQSQLTNS 787
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +3
Query: 120 LASNQELEEKLYNSVLAGNYDSAVAQSLEHEKQNRGSIIQNVVDDLIIDKRRNTMEYCYK 299
+ N E + +Y + SLE + N S I+ V D I + YC+
Sbjct: 903 MPENDPRREPFESRTKCYSYIFEILDSLESQMSNDSSAIKVDVYDTIQRSKDELFHYCFY 962
Query: 300 LW 305
W
Sbjct: 963 DW 964
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,311,057
Number of Sequences: 5004
Number of extensions: 44978
Number of successful extensions: 184
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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