Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14f24
         (662 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921...    32   0.47 
09_01_0142 - 2103224-2103864,2104264-2104399                           28   7.6  
06_01_0537 + 3860277-3860286,3860464-3860576,3861729-3861799,386...    28   7.6  
06_01_0527 + 3822051-3822318,3822408-3822520,3823673-3823743,382...    28   7.6  

>02_02_0346 -
           9214365-9214583,9214830-9214919,9215012-9215177,
           9215601-9215911,9215944-9216566,9216779-9216968,
           9217096-9217197,9217285-9217425,9217815-9218411,
           9219126-9219286,9220709-9220824,9221538-9221654,
           9221746-9221808,9221879-9221949
          Length = 988

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -1

Query: 464 IAECKS--FVRGIGCGTELQSEVVVSGNELDEVSGHDESKVKGEVLSNNVLSVADPE 300
           + ECK      GIGCG +   +V+  G ++DE  G  + K   E  + N ++   PE
Sbjct: 620 VTECKGDDTNEGIGCGGKGADDVIGKGKQVDEGIGFGDKKKHEEKQAPNAVAQNVPE 676


>09_01_0142 - 2103224-2103864,2104264-2104399
          Length = 258

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +2

Query: 308 RQRTAHC*KVLPL*L*THHGRK--LRQAHFQKLQPRSEARFHNQSLERKTCIRRWCR 472
           RQ T H  K  P+    +HGR    R  H   L P S A+ HNQ    +    + CR
Sbjct: 36  RQLTRHLIKYAPVQ--ANHGRSNIARDVHKSLLVPVSAAKVHNQKPAPRDQASQLCR 90


>06_01_0537 +
           3860277-3860286,3860464-3860576,3861729-3861799,
           3861887-3861978,3862080-3862167,3862264-3862375,
           3862503-3862599,3862710-3862791,3863153-3863273,
           3863459-3863566,3863717-3863819,3863996-3864171
          Length = 390

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -2

Query: 172 PARTLLYSFSSSSWLEARFTSMIISTTLALAASTHIANTTRSFIVTVTF 26
           P R+L YS +  +       S++   T +LA S H+  TT+ F VTV+F
Sbjct: 290 PGRSLHYSQAKGAG------SVLSFLTGSLALSKHVVETTKYFNVTVSF 332


>06_01_0527 +
           3822051-3822318,3822408-3822520,3823673-3823743,
           3823831-3823922,3824024-3824111,3824208-3824319,
           3824447-3824543,3824654-3824735,3825097-3825217,
           3825403-3825510,3825661-3825763,3825940-3826115
          Length = 476

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -2

Query: 172 PARTLLYSFSSSSWLEARFTSMIISTTLALAASTHIANTTRSFIVTVTF 26
           P R+L YS +  +       S++   T +LA S H+  TT+ F VTV+F
Sbjct: 376 PGRSLHYSQAKGAG------SVLSFLTGSLALSKHVVETTKYFNVTVSF 418


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,858,080
Number of Sequences: 37544
Number of extensions: 308981
Number of successful extensions: 1004
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)