Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14f24
         (662 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121656-1|AAM51983.1|  206|Drosophila melanogaster RE04513p pro...    29   5.6  
AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p pro...    28   9.9  
AF145687-1|AAD38662.1| 1146|Drosophila melanogaster BcDNA.LD2470...    28   9.9  
AE014296-2769|AAF49438.4|  598|Drosophila melanogaster CG18217-P...    28   9.9  
AE014296-2767|AAF49440.2| 1146|Drosophila melanogaster CG17286-P...    28   9.9  
AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA...    28   9.9  

>AY121656-1|AAM51983.1|  206|Drosophila melanogaster RE04513p
           protein.
          Length = 206

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = +3

Query: 15  ERPEKVTVTMKLLVVFAMCVLAASASVVDMIMDVNLASNQELEEKLYNSVLAGNYDSAVA 194
           E+P++  +  K  ++FA C+  ASA ++       LA+  ++EE   +      YD   A
Sbjct: 9   EQPKQPKMAFKFTILFAACIAVASAGIIPAA--APLAAVAQVEEYDPHPQYTYGYDVKDA 66

Query: 195 QSLEHEKQ---NRGSIIQNVVDDLIIDKRRNTMEY 290
            S + + Q     G ++Q        D  R  ++Y
Sbjct: 67  ISGDSKTQVETREGDVVQGQYSLNDADGYRRIVDY 101


>AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p
           protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 562 WLYLVLWTLKYTLLFSHKVMNFQLTSSVCLSAPSPNASLSFE 437
           +LY VLW L+Y  +F   V    L   + L   +P   +  E
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAPKDEIELE 249


>AF145687-1|AAD38662.1| 1146|Drosophila melanogaster BcDNA.LD24702
           protein.
          Length = 1146

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 123 ASNQELEEKLYNSVLAGNYDSAVAQSLEHEKQNRGSIIQN 242
           A   E+E  + NSVLAG+ D ++    +   +N  +I+ N
Sbjct: 270 APTSEIETSVSNSVLAGDPDFSLGNYFQTRSENIWNIVSN 309


>AE014296-2769|AAF49438.4|  598|Drosophila melanogaster CG18217-PA
           protein.
          Length = 598

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 123 ASNQELEEKLYNSVLAGNYDSAVAQSLEHEKQNRGSIIQN 242
           A   E+E  + NSVLAG+ D ++    +   +N  +I+ N
Sbjct: 270 APTSEIETSVSNSVLAGDPDFSLGNYFQTRSENIWNIVSN 309


>AE014296-2767|AAF49440.2| 1146|Drosophila melanogaster CG17286-PA
           protein.
          Length = 1146

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 123 ASNQELEEKLYNSVLAGNYDSAVAQSLEHEKQNRGSIIQN 242
           A   E+E  + NSVLAG+ D ++    +   +N  +I+ N
Sbjct: 270 APTSEIETSVSNSVLAGDPDFSLGNYFQTRSENIWNIVSN 309


>AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA,
           isoform A protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 562 WLYLVLWTLKYTLLFSHKVMNFQLTSSVCLSAPSPNASLSFE 437
           +LY VLW L+Y  +F   V    L   + L   +P   +  E
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAPKDEIELE 249


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,099,605
Number of Sequences: 53049
Number of extensions: 526990
Number of successful extensions: 1775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1775
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)