Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14e22
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.46 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   5.7  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   5.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.5  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   9.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 620 GILNPRIIRGITTSRSFSVIFVETPNNMSILS 525
           GI    +  G+T +R  S++  + PN ++IL+
Sbjct: 629 GIYQHNVASGLTKARGHSLLVADRPNFVTILA 660


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 430 FFYPLVDDPYMMGKIACANVLSDLYAMGVTECDNM 534
           FF P++   Y+ G+I+C  + S    +  TE +N+
Sbjct: 207 FFLPMLVMLYVYGRISCV-IASRHRNLEATESENV 240


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 286 VFREHLEVLCNFFPLDQQ 233
           +FR   ++   FFP D+Q
Sbjct: 126 IFRSSCDIDVEFFPFDEQ 143


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 286 VFREHLEVLCNFFPLDQQ 233
           +F+   E+   +FP DQQ
Sbjct: 140 IFKSSCEIDVRYFPFDQQ 157


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 95  DILHQNNDIYVFR 57
           D+L  NND+Y+++
Sbjct: 369 DVLLSNNDVYLYQ 381


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 95  DILHQNNDIYVFR 57
           D+L  NND+Y+++
Sbjct: 407 DVLLSNNDVYLYQ 419


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 370 LDCSVTPLRHGG 405
           LDCS+ P  H G
Sbjct: 25  LDCSIKPKDHNG 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,072
Number of Sequences: 438
Number of extensions: 3469
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)