Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14e14
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 237 4e-63
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 121 4e-28
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 118 4e-27
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 96 1e-20
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 77 9e-15
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 29 1.8
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 237 bits (580), Expect = 4e-63
Identities = 108/158 (68%), Positives = 133/158 (84%)
Frame = +1
Query: 103 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 282
RYDRAIT+FSPDGHL QVEYAQEAV+KGSTA EKKS+ LQ++RT+RK
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 283 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 462
I ++DDHV++AFAGL+ADAR+L++RA+IECQS+KLT+EDPVT+ YI+RYIA KQ++TQS
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQS 122
Query: 463 NGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKAN 576
GRRPFGIS LIGGFD+DG+P LF+TEPSG YYE+ AN
Sbjct: 123 PGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVAN 160
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 121 bits (291), Expect = 4e-28
Identities = 66/167 (39%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
Frame = +1
Query: 85 FLTMSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQE 264
FLT S YDR + FSP+G L QVEYA EAV+ GST+ EK+S +KL
Sbjct: 2 FLTRS-EYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 265 ERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLK 444
+ KI +D H+ + FAGL AD+R L+ RAQIE Q+ T + +E +T+ +A L
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 445 QKY----TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKA 573
++ +++ RPFG++ L G D +G+ LF +PSG + + KA
Sbjct: 121 LQFGDDDVKASMSRPFGVAMLFAGVDQEGA-KLFHLDPSGTFIDCKA 166
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 118 bits (283), Expect = 4e-27
Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Frame = +1
Query: 94 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 273
M+ RYD T+FSP+G L QVEYA EA+ T E+K+V KL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 274 V-RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQK 450
+ K+ L D++ AG+TADA ILIN + S++ + + + +E + + + KQ+
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQR 120
Query: 451 YTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKA 573
YTQ G+RPFG+S L G+D L+Q++PSG Y WKA
Sbjct: 121 YTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKA 161
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 99 bits (238), Expect = 1e-21
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 2/162 (1%)
Frame = +1
Query: 94 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 273
M Y ++T FSP G L+Q+EYA AV+ G + E ++
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLTDDQPK 60
Query: 274 VRKICLLDDHVVMAFAGLTADARILINRAQ-IECQSHKLTVEDPVTLEYITRYIAGLKQK 450
V +I H+ ++G+ D RIL+ +A+ I + + E+ T++ +T IA + Q+
Sbjct: 61 VEQI---SKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQE 116
Query: 451 YTQSNGRRPFGISCLIGGFDYD-GSPHLFQTEPSGIYYEWKA 573
YTQS G RPFG S LI G+D + G P LFQ +PSG Y+ WKA
Sbjct: 117 YTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKA 158
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 96.3 bits (229), Expect = 1e-20
Identities = 54/149 (36%), Positives = 80/149 (53%)
Frame = +1
Query: 103 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 282
+YD +TV+SP G L QVEYA EA+++GS K++ L + +K
Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KK 62
Query: 283 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 462
+ +D H ++ AGL +D RIL Q EC S + + V ++ + + Q TQ
Sbjct: 63 VYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQY 122
Query: 463 NGRRPFGISCLIGGFDYDGSPHLFQTEPS 549
GRRPFG+ LI G+D DG+ H+ QT+PS
Sbjct: 123 YGRRPFGVGILIAGYDKDGA-HIIQTDPS 150
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 77.0 bits (181), Expect = 9e-15
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Frame = +1
Query: 97 SARYDRAITVFSPDGHLLQVEYAQEAVRKGS-TAXXXXXXXXXXXXXEKKSVAKLQEERT 273
SA +DR IT+FSP+G + QVEYA +A+ + TA +K+ L T
Sbjct: 6 SAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADT 65
Query: 274 VRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKY 453
V + + V G+ DA+ I RAQ E S K + E + + +A L Q Y
Sbjct: 66 VTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYY 125
Query: 454 TQSNGRRPFGISCLIGGFDYDGSPHLFQTEPSGIY 558
TQ+ R G + L +D + P +++ +P+G Y
Sbjct: 126 TQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYY 160
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 72.5 bits (170), Expect = 2e-13
Identities = 48/156 (30%), Positives = 70/156 (44%)
Frame = +1
Query: 106 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 285
YD A + FSPDG + QVEYAQ+AV T +K +KL + ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 286 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 465
++D+V +A AG D L N A E +P+ ++ I +A +T
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGI 127
Query: 466 GRRPFGISCLIGGFDYDGSPHLFQTEPSGIYYEWKA 573
RPFG ++ LF EPSG+ YE+KA
Sbjct: 128 S-RPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKA 162
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 394 EDPVTLEYITRY---IAGLKQKYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEP-SGIYY 561
++P+T E++TRY + Q +T SNGR+ + FD S TEP +G YY
Sbjct: 689 KNPITKEFVTRYTTEVHSKNQSFTDSNGRQ-----AMERFFDGATSFEYSDTEPIAGNYY 743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,162,178
Number of Sequences: 27780
Number of extensions: 276510
Number of successful extensions: 649
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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