Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14d24
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 75 3e-14
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 75 3e-14
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 34 0.072
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 34 0.072
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 34 0.072
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 31 0.51
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.7
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.7
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 28 4.7
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 6.2
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.2
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.2
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 28 6.2
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 27 8.2
U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 27 8.2
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 75.4 bits (177), Expect = 3e-14
Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 38/186 (20%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PAC- 298
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 323 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 382
Query: 299 -------------HCDYDLNQVCGSDNHTYDNACLLNCATA-TNPGLSILYSGLCA---- 424
C+ + VC ++ T+DN C + + T + + + G C
Sbjct: 383 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 442
Query: 425 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDC-LLNCATINDSRLGI 574
D K +VDG K +CT E K VCGSDG TY+N+C L N A + + +
Sbjct: 443 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 575 EYYGPC 592
+Y C
Sbjct: 503 KYNSAC 508
Score = 66.9 bits (156), Expect = 1e-11
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 42/190 (22%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 283
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 454
Query: 284 ----GFPAC---HCDYDLNQVCGSDNHTYDNACLL-NCATATNPGLSILYSGLC-ADEVK 436
G P C C + +VCGSD TY N C L N A + + Y+ C A ++K
Sbjct: 455 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 514
Query: 437 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCLLNCATINDSR 565
V G ++ C C E K VCG+DG+TY+++C + + + S+
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Query: 566 LGI-EYYGPC 592
+ + G C
Sbjct: 575 FVMTAFEGKC 584
Score = 53.6 bits (123), Expect = 1e-07
Identities = 49/181 (27%), Positives = 72/181 (39%), Gaps = 37/181 (20%)
Frame = +2
Query: 134 PPSCACYRNQ--RPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE---------G 277
P C Y + + VCGTDG TY++EC + A + ++G C E
Sbjct: 537 PDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAFEGKCDECLHVQCRYGE 596
Query: 278 NVGFPACHCDYDLN-------QVCGSDNHTYDNACLLNCATATNPG-LSILYSGLC-ADE 430
C C Y+ ++CG + Y + C L A+ +S + C + +
Sbjct: 597 ECRSGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPPSHCHSSK 656
Query: 431 VKIVDGPSKYP------------SCTC-TREMK---PVCGSDGITYNNDCLLNCATINDS 562
D + P +CTC T + P+CGSDGI YNN C LN + D
Sbjct: 657 TSFPDFKVRRPCACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHLNTISCRDQ 716
Query: 563 R 565
R
Sbjct: 717 R 717
Score = 40.7 bits (91), Expect = 8e-04
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 39/186 (20%)
Frame = +2
Query: 110 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE- 274
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 452 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEAC 511
Query: 275 ---------------GNVGFPACHC-----DYDL---NQVCGSDNHTYDNAC-LLNCATA 382
G C C Y++ +VCG+D TY + C + A
Sbjct: 512 KLKKEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACH 571
Query: 383 TNPGLSILYSGLCAD--EVKIVDGPS-KYPSCTCTREMKP-------VCGSDGITYNNDC 532
+ + + G C + V+ G + C C+ +CG +G+ Y + C
Sbjct: 572 QSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCPANPPLSARICGENGVLYPSLC 631
Query: 533 LLNCAT 550
L A+
Sbjct: 632 HLQLAS 637
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Frame = +2
Query: 323 VCGSDNHTYDNACLLN---CATATNPGLSIL------YSGLCADEVKIVDGPSKYPSCTC 475
VC S Y ++C L C + TN + + C + G + P C C
Sbjct: 260 VCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKC 319
Query: 476 ----TREMKPVCGSDGITYNNDCLLNCATINDSR 565
T VCG+DG TY N+C L A + +
Sbjct: 320 SEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 353
Score = 36.3 bits (80), Expect = 0.018
Identities = 34/113 (30%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Frame = +2
Query: 263 PCSEGNVGFPACHCDYDLNQVCGSDNHTYDNACLL--NCATATNPG-LSIL--YSGLCAD 427
PC G C+ + C N + C L N + T G +S L +S C
Sbjct: 789 PCGCSAFGSSRSDCEQTTGK-CECKNGALGDKCDLCPNGSMMTAGGCVSQLDCHSLRCFH 847
Query: 428 EVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCLLNCATIN 556
K V PS +P C C + VCGSDG TY+N C L N
Sbjct: 848 GAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACN 900
Score = 34.7 bits (76), Expect = 0.054
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 137 PSCACYRNQRPVCGTDGKTYNNECLLD-CATRDDPGLRV--RYQGPCSEGNVGFPACHCD 307
P+C N P+CG+DG YNN+C L+ + RD + V E V +C C
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHLNTISCRDQREIHVLPLISHWIGESRV-LDSCQC- 740
Query: 308 YDLNQVCGSDNHTYDNACLLNC 373
N+V GS HT D C
Sbjct: 741 ---NRV-GSFGHTCDETGQCKC 758
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 75.4 bits (177), Expect = 3e-14
Identities = 58/186 (31%), Positives = 82/186 (44%), Gaps = 38/186 (20%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLLDCAT-RDDPGLRVRYQG-------PCSEGNVGF-PAC- 298
C N VCGTDGKTY NEC L A ++ + V +G PC + GF +C
Sbjct: 331 CTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCV 390
Query: 299 -------------HCDYDLNQVCGSDNHTYDNACLLNCATA-TNPGLSILYSGLCA---- 424
C+ + VC ++ T+DN C + + T + + + G C
Sbjct: 391 VKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVC 450
Query: 425 ---DEVK------IVDGPSKYPSCTCTREMKPVCGSDGITYNNDC-LLNCATINDSRLGI 574
D K +VDG K +CT E K VCGSDG TY+N+C L N A + + +
Sbjct: 451 ATFDSCKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 575 EYYGPC 592
+Y C
Sbjct: 511 KYNSAC 516
Score = 66.9 bits (156), Expect = 1e-11
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 42/190 (22%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLL---DCATRDDPGLRVRYQGPCSEGNV------------ 283
C RPVC T+G+T++NEC + C T+ ++V++QG C G
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDSCKKPQVC 462
Query: 284 ----GFPAC---HCDYDLNQVCGSDNHTYDNACLL-NCATATNPGLSILYSGLC-ADEVK 436
G P C C + +VCGSD TY N C L N A + + Y+ C A ++K
Sbjct: 463 VVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLK 522
Query: 437 ---------IVDGPSKYPSCTCT--------REMKPVCGSDGITYNNDCLLNCATINDSR 565
V G ++ C C E K VCG+DG+TY+++C + + + S+
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Query: 566 LGI-EYYGPC 592
+ + G C
Sbjct: 583 FVMTAFEGKC 592
Score = 40.7 bits (91), Expect = 8e-04
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 39/186 (20%)
Frame = +2
Query: 110 QVIATLAYPPSC---ACYRNQRPVCGTDGKTYNNEC-LLDCATRDDPGLRVRYQGPCSE- 274
QV + P C +C + VCG+DGKTY+NEC L + A + V+Y C
Sbjct: 460 QVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEAC 519
Query: 275 ---------------GNVGFPACHC-----DYDL---NQVCGSDNHTYDNAC-LLNCATA 382
G C C Y++ +VCG+D TY + C + A
Sbjct: 520 KLKKEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACH 579
Query: 383 TNPGLSILYSGLCAD--EVKIVDGPS-KYPSCTCTREMKP-------VCGSDGITYNNDC 532
+ + + G C + V+ G + C C+ +CG +G+ Y + C
Sbjct: 580 QSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYNCPANPPLSARICGENGVLYPSLC 639
Query: 533 LLNCAT 550
L A+
Sbjct: 640 HLQLAS 645
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Frame = +2
Query: 323 VCGSDNHTYDNACLLN---CATATNPGLSIL------YSGLCADEVKIVDGPSKYPSCTC 475
VC S Y ++C L C + TN + + C + G + P C C
Sbjct: 268 VCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKC 327
Query: 476 ----TREMKPVCGSDGITYNNDCLLNCATINDSR 565
T VCG+DG TY N+C L A + +
Sbjct: 328 SEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQK 361
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 10/50 (20%)
Frame = +2
Query: 419 CADEVKIVDGPSKYPSCTCTREMK----------PVCGSDGITYNNDCLL 538
C K V PS +P C C + VCGSDG TY+N C L
Sbjct: 784 CFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCEL 833
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/79 (31%), Positives = 29/79 (36%), Gaps = 11/79 (13%)
Frame = +2
Query: 227 RDDPGLRVRYQGPCSEGNVGFPACHCDYDLNQ----------VCGSDNHTYDNACLLNC- 373
RD LR + C FP C C N VCGSD TY N C L
Sbjct: 777 RDCHSLRCFHGAKCVPSPSSFPDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMF 836
Query: 374 ATATNPGLSILYSGLCADE 430
A + + G+C DE
Sbjct: 837 ACKHQIDVVPVSMGICDDE 855
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 68.9 bits (161), Expect = 3e-12
Identities = 46/139 (33%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 134 PPSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACHCDYD 313
PP C C RPVCGTD TYNN C L C R + L Y G C + C+
Sbjct: 16 PPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKK------ECEKV 69
Query: 314 LNQVCGSDNHTYDNAC---LLNCATATNPGLSI--LYSGLCADEVKIVDGPSKYPSCTCT 478
+C + T+ N C C + GLS+ L+ G C+ + +CT T
Sbjct: 70 GTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSK-------DCNHNCTNT 122
Query: 479 REMKPVCGSDGITYNNDCL 535
E PVC ++G Y N C+
Sbjct: 123 -EFDPVCDTNGSVYRNLCV 140
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +2
Query: 431 VKIVDGPSKYPSCTCTREMKPVCGSDGITYNNDCLLNCATINDSRLGIEYYGPCADK 601
+ + G S P C C ++PVCG+D +TYNN C L C + L Y G C DK
Sbjct: 7 ILLFTGFSPPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDK 63
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Frame = +2
Query: 140 SCACYRNQRPVCGTDGKTYNNECLL--DCATRDDPGLRVRYQGPCSEGNVGFPACHCDYD 313
S C + P+CGT+G T+ N C L + + + V Y G C + N C D
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN-------CPSD 821
Query: 314 LNQVCGSDNHTYDNAC---LLNCATATNPGLSILYSGLCADEVKIVDGPSKYPSCTCTRE 484
+ VC S T+ N C + C G L D+ ++ + K + C +E
Sbjct: 822 FSPVCDSKGSTHQNICHFGVKRCIAERTFG-----DVLTIDKFEVCN-EVKECNNACPKE 875
Query: 485 MKPVCGSDGITYNNDCLLN 541
PVC S+G N+C L+
Sbjct: 876 YSPVCASNGQNIVNECELD 894
Score = 49.6 bits (113), Expect = 2e-06
Identities = 49/156 (31%), Positives = 63/156 (40%), Gaps = 14/156 (8%)
Frame = +2
Query: 167 PVCGTDGKTYNNECLLD---C--ATRDDPGLRVRYQGPCSEGNVGFPACHCDYDLNQVCG 331
PVC T+G T+ N CL+D C ++ ++V YQG C CD D VC
Sbjct: 931 PVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQ-------PCDEDKTPVC- 982
Query: 332 SDNHTYDNAC---LLNC-ATATNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVC 499
T+ N C + C A N LSI YSG C P C VC
Sbjct: 983 DGTITHPNICRFRIAQCEAERVNKTLSIAYSGECC----------LLPKGEC-ESSGAVC 1031
Query: 500 GSDGITYNNDCLLN-----CATINDSRLGIEYYGPC 592
S+G T+ N C+ TI+ L I + G C
Sbjct: 1032 DSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSE---GNVGFPACHCDYDLN 319
C ++ P+C +D TY N C D L V ++G CSE PA + D +
Sbjct: 590 CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSP-DES 648
Query: 320 QVCGSDNHTYDNAC---LLNCATATNPG--LSILYSGLCADEVKIVDGPSKYPSCTCTRE 484
VC D T + C +L+C G L++ Y G+C V+ D T +
Sbjct: 649 FVCLEDQST-KSLCEYQMLSCIFERGYGVNLTVQYIGVCCPPVESCD----------TEK 697
Query: 485 MKPVCGSDGITYNNDCLLN 541
PVC G T+ +C LN
Sbjct: 698 PDPVCTDSGATFLTECELN 716
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/163 (24%), Positives = 59/163 (36%), Gaps = 15/163 (9%)
Frame = +2
Query: 149 CYRNQRPVCGTDGKTYNNEC---LLDCATRDDPG--LRVRYQGPCSEGNVGFPACHCDYD 313
C ++ PVC T +T+ N C C G + + + G C C D
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 314 LNQVCGSDNHTYDNACLL---NCATATNPGLSILYSGLCADEVKIVDGPSKYPSC--TCT 478
+C + N T+ C NC N + + + + K C TC+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 479 REMKPVCGSDGITYNNDCLLNCATINDSRLGI-----EYYGPC 592
R++KPVC T+ N C N +LGI Y PC
Sbjct: 377 RDVKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPC 419
Score = 45.2 bits (102), Expect = 4e-05
Identities = 46/164 (28%), Positives = 66/164 (40%), Gaps = 31/164 (18%)
Frame = +2
Query: 134 PPSCACYRNQR-PVCGTDGKTYNNECLL---DCATR--DDPGLRVRYQGPCSEG------ 277
PP +C + PVC G T+ EC L +C + D P L V QG C +
Sbjct: 688 PPVESCDTEKPDPVCTDSGATFLTECELNIENCKLKKLDQPKLVVVSQGICEKDMLTDDF 747
Query: 278 ---------NVGFP-------ACHCDYDLNQVCGSDNHTYDNACLLN---CATATNPGLS 400
N+ F + CD + +CG++ T+ NAC L C +A N +
Sbjct: 748 SSNRNFQKPNIEFKRENTFNCSMECDNSYDPLCGTNGVTFTNACSLQKEICESA-NSTIE 806
Query: 401 ILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSDGITYNNDC 532
+ Y+G+C D C + PVC S G T+ N C
Sbjct: 807 VAYTGMCCD-------------TNCPSDFSPVCDSKGSTHQNIC 837
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Frame = +2
Query: 137 PSCACYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACH--CDY 310
P C + +PVC + G + N C + + E + AC C
Sbjct: 533 PKPNCPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTD 592
Query: 311 DLNQVCGSDNHTYDNACLLNCATATNPGLSILYSGLCADEVKIVDGPSKYPS 466
D + +C SD TY+N C + L +L+ G C++ +D P P+
Sbjct: 593 DKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE---CLDSPCALPA 641
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +2
Query: 290 PACHCDYDLNQVCGSDNHTYDNACLLNCAT--ATNPGLSILYSGLCADEVKIVDGPSKYP 463
P +C D VC S + + N C + A + G I + +E I + P
Sbjct: 533 PKPNCPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQI---HIATEENCISKEACQMP 589
Query: 464 SCTCTREMKPVCGSDGITYNNDCLLNCATINDSRLGIEYYGPCAD 598
CT + P+C SD TY N C DS L + + G C++
Sbjct: 590 ---CTDDKHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSE 631
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +2
Query: 146 ACYRNQRPVCGTDGKT-------YNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACHC 304
+C + +PVC + G+T +N++C+ D + L + YQG C PA C
Sbjct: 1072 SCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCC------PA-GC 1124
Query: 305 DYDLNQVCGSDNHTYDNACLLN 370
+L+ +C + Y N+C N
Sbjct: 1125 TDELSVICDQHENIYRNSCYFN 1146
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 464 SCTCTREMKPVCGSDGITYNNDCLLN---CATINDSRLGIEYYGPCAD 598
S C P+CG++G+T+ N C L C + N S + + Y G C D
Sbjct: 769 SMECDNSYDPLCGTNGVTFTNACSLQKEICESAN-STIEVAYTGMCCD 815
Score = 30.7 bits (66), Expect = 0.88
Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 9/133 (6%)
Frame = +2
Query: 170 VCGTDGKTYNNECLLD-----CATRDDPGLRVRYQGPC----SEGNVGFPACHCDYDLNQ 322
VC ++G+T+ N C+ T L + + G C S G P C +
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQPVCD---SRGR 1086
Query: 323 VCGSDNHTYDNACLLNCATATNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCG 502
S H +++ C+ + N L++ Y G C CT E+ +C
Sbjct: 1087 THDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCP-------------AGCTDELSVICD 1133
Query: 503 SDGITYNNDCLLN 541
Y N C N
Sbjct: 1134 QHENIYRNSCYFN 1146
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 49.2 bits (112), Expect = 2e-06
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Frame = +2
Query: 140 SCACYRNQRPVCGTDGK---TYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPACHCDY 310
+C+C PVC +G TY+N+C+ CA + L + Y+G C A +C+
Sbjct: 24 TCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCS------ARYCNM 77
Query: 311 DLNQVCGSDNHTYDNACLLNCATATNPGLSILYSGLCADEVKIVDGPSKYPSCT--CTRE 484
VC S+ Y C + L + + +D + SCT C E
Sbjct: 78 FEQPVC-SEGQMYQTVCEFE-------ERQCIEFKLFKNHIS-MDSSQEKCSCTAPCPTE 128
Query: 485 MKPVCGSDGITYNNDC-LLNCATINDSRLG----IEYYGPCAD 598
PVC G T+ N C LN + ++L ++Y G C +
Sbjct: 129 WNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCE 171
Score = 37.9 bits (84), Expect = 0.006
Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 16/175 (9%)
Frame = +2
Query: 125 LAYPPSCA----CYRNQRPVCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFP 292
L Y SC C ++PVC ++G+ Y C + + L + S
Sbjct: 63 LLYEGSCCSARYCNMFEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSC 121
Query: 293 ACHCDYDLNQVCGSDNHTYDNAC-LLN--C--ATATNPGLSILYSGLCADEVKIVDGPSK 457
C + N VC T+ N C LN C N L + YSG+C +++
Sbjct: 122 TAPCPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCEDM-------- 173
Query: 458 YPSCTCTREMKPVCGSDGITYNNDC---LLNCAT----INDSRLGIEYYGPCADK 601
C+ + VC S+G T+ + C + C I RL I GPC K
Sbjct: 174 ---CSAGQTSLTVCDSEGNTHTDICSFYIAKCRQMRRGIGKKRLQIAGVGPCKPK 225
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 34.3 bits (75), Expect = 0.072
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 11/128 (8%)
Frame = +2
Query: 182 DGKTYNNECLLDCATRDDPGLRVRY---QG-PCSEGNVGFPACHCDYD-------LNQVC 328
DG C+ C G++V Y G C+ GN+ P C +N +C
Sbjct: 1006 DGSDAVGACIPSCTGDGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLC 1065
Query: 329 GSDNHTYDNACLLNCATATNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSD 508
+ N C T + GL + +G+C D + +G S TCT E+ +
Sbjct: 1066 PTGYTVQGNLCCSATCTDGSTGLPSV-NGVCIDGYSLTNGVCCPASVTCTDEIS-IGPCT 1123
Query: 509 GITYNNDC 532
G +N C
Sbjct: 1124 GTGFNGGC 1131
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 34.3 bits (75), Expect = 0.072
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 11/128 (8%)
Frame = +2
Query: 182 DGKTYNNECLLDCATRDDPGLRVRY---QG-PCSEGNVGFPACHCDYD-------LNQVC 328
DG C+ C G++V Y G C+ GN+ P C +N +C
Sbjct: 348 DGSDAVGACIPSCTGDGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLC 407
Query: 329 GSDNHTYDNACLLNCATATNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSD 508
+ N C T + GL + +G+C D + +G S TCT E+ +
Sbjct: 408 PTGYTVQGNLCCSATCTDGSTGLPSV-NGVCIDGYSLTNGVCCPASVTCTDEIS-IGPCT 465
Query: 509 GITYNNDC 532
G +N C
Sbjct: 466 GTGFNGGC 473
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 34.3 bits (75), Expect = 0.072
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 11/128 (8%)
Frame = +2
Query: 182 DGKTYNNECLLDCATRDDPGLRVRY---QG-PCSEGNVGFPACHCDYD-------LNQVC 328
DG C+ C G++V Y G C+ GN+ P C +N +C
Sbjct: 348 DGSDAVGACIPSCTGDGCGGVQVSYYCGSGYTCTTGNICCPINSCPNGGEVLGPTINGLC 407
Query: 329 GSDNHTYDNACLLNCATATNPGLSILYSGLCADEVKIVDGPSKYPSCTCTREMKPVCGSD 508
+ N C T + GL + +G+C D + +G S TCT E+ +
Sbjct: 408 PTGYTVQGNLCCSATCTDGSTGLPSV-NGVCIDGYSLTNGVCCPASVTCTDEIS-IGPCT 465
Query: 509 GITYNNDC 532
G +N C
Sbjct: 466 GTGFNGGC 473
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 32.7 bits (71), Expect = 0.22
Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 21/147 (14%)
Frame = +2
Query: 167 PVCGTDGKTYNNECLLDCATRDDPGLRVRYQ----GPC-SEGNVGFPACHCDYDLNQVCG 331
P+C ++ NN+C C + ++ Q G C S P C+C CG
Sbjct: 119 PICA---QSCNNQCSSSCGNSAPQIVVLQPQQNQCGSCQSSCQQTCPTCNCQSACAPACG 175
Query: 332 SDNHT-------YDNACLLNC-----ATATNPGLSILYSGLCADEVKIVDGPSKYPSC-- 469
+N+ DN+C NC ++ + P C + P PSC
Sbjct: 176 GNNNNQQIIVVQQDNSCSSNCNNQCSSSCSTPICIQSCQSSCQQACQPTCQPQCMPSCSS 235
Query: 470 TCTREMKP--VCGSDGITYNNDCLLNC 544
+CT P + G + +N C C
Sbjct: 236 SCTSNQAPIVIVAQQGDSCSNSCSNQC 262
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 31.5 bits (68), Expect = 0.51
Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 8/90 (8%)
Frame = +2
Query: 170 VCGTDGKTYNNECLLDCATRDDPGLRVRYQGPCSEGNVGFPA-------CHCDYDLNQVC 328
VC + L C R+ G+ + Y+ E F CHC + N VC
Sbjct: 408 VCHVFALLFTTGLLSHCPQREFVGINLGYEDLSIEKMHDFSISSTCNADCHCKMEWNPVC 467
Query: 329 G-SDNHTYDNACLLNCATATNPGLSILYSG 415
+ H Y +AC C T S +SG
Sbjct: 468 DRNTGHMYYSACHAGCTGRTTIDGSSQWSG 497
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 296 CHCDYDLNQVCGSDNH-TYDNACLLNCA 376
CHCD N VC D+ T+ + C CA
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPCHAGCA 476
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 401 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 556
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQN 58
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 401 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 556
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQN 58
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 401 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 556
I + L A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAALLASSLLLVEGTSIRDKRQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQN 58
>Z81547-3|CAB04461.1| 253|Caenorhabditis elegans Hypothetical
protein F53F8.4 protein.
Length = 253
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 131 YPPSCACYRNQRPVCG 178
Y PSCA Y RP CG
Sbjct: 32 YQPSCAAYSQPRPSCG 47
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 401 ILYSGLCADEVKIVDGPS---KYPSCTCTREMKPVCGSDGITYNNDCLLNCATIN 556
I + + A + +V+G S K SC C +++P C TY +C+ N
Sbjct: 4 IAIAAILASSLLLVEGTSIRDKRQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQN 58
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 99 RCCT---CCRTCCCTRCCTCCRPCCCG 122
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 97 RCCT---CCRTCCCTRCCTCCRPCCCG 120
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 98 RCCT---CCRTCCCTRCCTCCRPCCCG 121
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 98 RCCT---CCRTCCCTRCCTCCRPCCCG 121
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 527 RCCT*YRHCRRPASSRACTCTKGICWG 447
RCCT CR +R CTC + C G
Sbjct: 99 RCCT---CCRTCCCTRCCTCCRPCCCG 122
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 610 DYNLISARPVVFDAESGVIDCG 545
DY++I+ +PVV D SGVI G
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAG 23
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = -3
Query: 201 LLYVFPSV-------PHTGRWFL*HAQLGGYASVAITCVAASNIPILKYIVN*YIFLSPS 43
LLY FP + H +W + ++ ++ ++C+ +N+ I +I +I+ SPS
Sbjct: 188 LLYHFPQIILPCIGKKHFKKWDQYYWEVESMSTNTLSCICKNNMGIFMHIQEHFIYKSPS 247
Query: 42 LF 37
F
Sbjct: 248 GF 249
>U88173-9|AAK21384.3| 320|Caenorhabditis elegans Hypothetical
protein F46F11.7 protein.
Length = 320
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 173 CGTDGKTYNNECLLD-C-ATRDDPGLRVRYQGPCSEGNVGFPACHCDYDLNQVC 328
CG GK N +C+L+ C D G R G C + F H D N +C
Sbjct: 96 CGKHGKCVNGQCILNRCQGVSCDEGSMCR-DGKCEKVLETFCIGHADCGPNMLC 148
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 356 ACLLNCATATNPGLSILYSGLCADEVKIVDGP---SKYPSCTCTRE-MKPVCGSDGITYN 523
A L++ A T S++ G D++KI +GP C C + + PVC G Y
Sbjct: 479 AALISFANGTVGCKSVI--GQIGDQIKI-NGPVFDGCRDDCMCEQTPLYPVCDVSGSAYY 535
Query: 524 NDCLLNCA 547
+ C CA
Sbjct: 536 SPCHAGCA 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,998,977
Number of Sequences: 27780
Number of extensions: 317529
Number of successful extensions: 793
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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