Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14d21
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.11 |||actin binding methyltransferase |Schizosaccharomyc... 29 0.59
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 29 0.59
SPAP27G11.08c |meu32|mug11|sequence orphan|Schizosaccharomyces p... 28 1.0
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 28 1.4
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 27 1.8
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 27 1.8
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 27 1.8
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 27 1.8
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 27 1.8
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 27 1.8
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 27 1.8
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 27 1.8
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 27 1.8
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 27 1.8
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 27 1.8
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 27 2.4
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 26 4.1
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 26 4.1
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 26 5.5
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 25 7.2
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 25 7.2
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 25 7.2
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 25 7.2
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 25 9.5
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 25 9.5
SPBC211.06 |gfh1||gamma tubulin complex subunit Gfh1|Schizosacch... 25 9.5
SPAC1952.16 |rga9||RhoGAp, GTPase activator towards Rho/Rac/Cdc4... 25 9.5
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 9.5
>SPBC3H7.11 |||actin binding methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 248
Score = 29.1 bits (62), Expect = 0.59
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Frame = +2
Query: 14 FELENYRK*SKMRLTQALKRQHIDFMFKKHWLVQGKRIPIDTGVEKKLKDMGIEVQDAL- 190
F +E Y+K SK + KR F +HWL + G+ KL +EV +
Sbjct: 10 FWVEKYKKESKKSWDKFYKRNETRFFKDRHWL--DREFDCYFGLPDKLPLTILEVGCGVG 67
Query: 191 EFVKGKREEREHIQIIGPYEQPLPLD--KNHPNYKEK---PCLTLNQDNVLLEGLSQAQV 355
V E + +++I P +D K H Y E P + ++ LLE L A +
Sbjct: 68 NLVYPLLEVQPNLKIYCCDFSPRAIDFVKKHSCYNENRVFPFVNDITEDSLLEVLGSACI 127
Query: 356 LTKTIIAQDKLPPKIEELSRLPAPAAI 436
T T I P+ ++L + A++
Sbjct: 128 DTLTAIFVLSAIPREKQLRSIKNLASV 154
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 29.1 bits (62), Expect = 0.59
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 177 TSIPISFNFFSTPVSIGILLP*TSQCFLNIKSIC 76
TS+P+S+NF P+ + LP +N+K C
Sbjct: 156 TSLPMSYNFLQNPLVGRVRLPNGKTTIVNLKGQC 189
>SPAP27G11.08c |meu32|mug11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 392
Score = 28.3 bits (60), Expect = 1.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 232 LYVFAFFPFSFYEFKSILNLNTHILQFFFNARV 134
+Y+ F + YEFK I L T +++F ++
Sbjct: 3 VYLSEFINWKLYEFKKINELGTSTFRYYFKGKI 35
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 242 PYEQPLPLDKNHPNYKEKPCLTLNQ 316
P P L+ N P Y EKP LTL Q
Sbjct: 244 PSISPHSLNPNFPQYTEKPALTLLQ 268
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 PKIKDPQRPAYNFRRILGITDSRRNQILT-----NKLLQLVEKTSDREVTQN 640
P KD + + NF + ITD +NQ++T KLL L+ D+ V +N
Sbjct: 838 PIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLL-NNEDKRVEEN 888
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 290 EKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENV 448
E+P + DN LEG+S+ L +T + + I S +P+P IH+N+
Sbjct: 105 EEPIVPEEPDN--LEGVSEETPLKETSLELSE-EEIITSKSPIPSPETIHKNI 154
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 272 NHPNYKEKPC-LTLNQDNV---LLEGLSQAQVLTKTIIAQDKLPPKIEELSRLP 421
+H + PC ++++ + +LEGL+Q ++ +D + KI +SRLP
Sbjct: 231 SHDTFLSLPCHISMHTSYMTQGILEGLTQKISKHSDVLNRDAMYSKISRISRLP 284
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 567 DETKY*LTNYYNLLRKPVIEK*PKTNM 647
D K +T+Y+NL RK +I++ PK M
Sbjct: 695 DLIKELITSYFNLTRKIIIDQVPKVIM 721
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 194 FVKGKREEREHIQIIGPYEQPLPLDKN 274
F K ++E + +++ G QP+ L+KN
Sbjct: 327 FKKNDQKELDRVEVYGALSQPVQLNKN 353
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 198 TNSRAS*TSIPISFNFFSTPVS 133
TN+ T IP SFNF++T S
Sbjct: 205 TNTAHDATDIPSSFNFYNTQAS 226
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 17 ELENYRK*SKMRLTQALKRQHIDFMFKKHWLVQGK 121
+L +Y + K RLTQ ++ + + KK W + G+
Sbjct: 296 QLSSYER-DKARLTQQIRELEAENVAKKSWTMMGE 329
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 364 NYNSSRQTSSKNRRTITTTSSGCYSRKRKK 453
N + ++ SK++R + TSSGC + K
Sbjct: 473 NQSPDTRSVSKSKRLVRETSSGCLFKNHSK 502
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/33 (24%), Positives = 23/33 (69%)
Frame = +2
Query: 539 RRILGITDSRRNQILTNKLLQLVEKTSDREVTQ 637
RR+ G+T++ +I + + + +V++ +D E+++
Sbjct: 75 RRVAGVTNNVTARISSKRKINMVDEANDTEISK 107
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 218 VLPVFLLRIQEHLEPQY--PYPSIF 150
+LPVF+L + H EP++ P SIF
Sbjct: 303 LLPVFILSLFPHQEPRFLLPAASIF 327
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 486 SRKNYRKSKTHSDQLIIFVE 545
+ K++RKS+ + D L+IF+E
Sbjct: 1012 THKSFRKSEEYVDDLLIFME 1031
>SPBC211.06 |gfh1||gamma tubulin complex subunit
Gfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 577
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +2
Query: 245 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 424
YE PLPL K+ TL + ++ + S Q+ ++ ++ +E + LP
Sbjct: 255 YEMPLPLTKSSVTKLADEMFTLVSEKIIFQLASFHQIF--DLVKMLEMVMLLENVEFLPT 312
Query: 425 PAAIHENVKKSILTAN 472
+ + +V+ ++N
Sbjct: 313 LSEMFRDVRGEYCSSN 328
>SPAC1952.16 |rga9||RhoGAp, GTPase activator towards
Rho/Rac/Cdc42-like small GTPases|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 684
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 341 SQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHENVKKSILTANV 475
S + +L K+ +K P EE + LP+ AAIH+ + ++ A++
Sbjct: 48 SCSDLLFKSFSKFNKHHPLNEESNDLPSDAAIHQLYESYLMEASL 92
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 263 LDKNHPNYKEKPCLTLNQDNV 325
L++ HP+ KEKP + N + V
Sbjct: 655 LERRHPSSKEKPIVYSNSERV 675
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,757,226
Number of Sequences: 5004
Number of extensions: 59434
Number of successful extensions: 180
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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