Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14d21
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ205685-1|ABA27099.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.055
BC000041-1|AAH00041.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.055
AL357673-2|CAH73897.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.055
AL161644-8|CAI23564.1|  423|Homo sapiens mitochondrial ribosomal...    37   0.055
AF325707-1|AAG52881.1|  423|Homo sapiens ribosomal protein L2 pr...    37   0.055
AL138742-2|CAO03537.1| 1403|Homo sapiens KIAA1009 protein.             30   6.3  
AL138742-1|CAI22698.2| 1327|Homo sapiens KIAA1009 protein.             30   6.3  
AB023226-1|BAA76853.2| 1345|Homo sapiens KIAA1009 protein protein.     30   6.3  

>DQ205685-1|ABA27099.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 245 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 424
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 425 PAAIHENVKKSIL 463
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>BC000041-1|AAH00041.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 245 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 424
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 425 PAAIHENVKKSIL 463
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>AL357673-2|CAH73897.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 245 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 424
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 425 PAAIHENVKKSIL 463
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>AL161644-8|CAI23564.1|  423|Homo sapiens mitochondrial ribosomal
           protein L37 protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 245 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 424
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 425 PAAIHENVKKSIL 463
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>AF325707-1|AAG52881.1|  423|Homo sapiens ribosomal protein L2
           protein.
          Length = 423

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = +2

Query: 245 YEQPLPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPA 424
           Y  P PL + HP YK++ C   +    LLEG+ QA  LTKT + +  LP K+  LS +  
Sbjct: 88  YRSP-PLHE-HPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEG-LPEKV--LSLVDD 142

Query: 425 PAAIHENVKKSIL 463
           P    EN  + +L
Sbjct: 143 PRNHIENQDECVL 155


>AL138742-2|CAO03537.1| 1403|Homo sapiens KIAA1009 protein.
          Length = 1403

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 45/189 (23%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
 Frame = +2

Query: 95   KKHWLVQGKRIPIDTGVEKKLKDMGIEVQDALEFVKGKREEREHI--QIIGPYEQPLPLD 268
            K+ WL  G+     TG  +KLK +  E+Q+    ++G ++E E +  Q+    EQ     
Sbjct: 685  KQRWLHFGEAADPVTG--EKLKQIQKEIQEQETLLQGYQQENERLYNQVKDLQEQN---K 739

Query: 269  KNHPN-YKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHEN 445
            KN    +KE   L  ++   L E + +++ L++  + +D  P + +  + L A   + + 
Sbjct: 740  KNEERMFKENQSL-FSEVASLKEQMHKSRFLSQ--VVEDSEPTRNQNFTDLLAELRMAQK 796

Query: 446  VKKSILTANVFDCEQKKLPKIKDPQRPAYNFRRILGITDSRRNQI--LTNKLL---QLVE 610
             K S+L     D ++ K    +D Q    +F ++    D  ++QI  +T + L   +++E
Sbjct: 797  EKDSLLE----DIKRLK----QDKQALEVDFEKMKKERDQAKDQIAYVTGEKLYEIKILE 848

Query: 611  KTSDREVTQ 637
            +T  +E+++
Sbjct: 849  ETHKQEISR 857


>AL138742-1|CAI22698.2| 1327|Homo sapiens KIAA1009 protein.
          Length = 1327

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 45/189 (23%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
 Frame = +2

Query: 95   KKHWLVQGKRIPIDTGVEKKLKDMGIEVQDALEFVKGKREEREHI--QIIGPYEQPLPLD 268
            K+ WL  G+     TG  +KLK +  E+Q+    ++G ++E E +  Q+    EQ     
Sbjct: 609  KQRWLHFGEAADPVTG--EKLKQIQKEIQEQETLLQGYQQENERLYNQVKDLQEQN---K 663

Query: 269  KNHPN-YKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHEN 445
            KN    +KE   L  ++   L E + +++ L++  + +D  P + +  + L A   + + 
Sbjct: 664  KNEERMFKENQSL-FSEVASLKEQMHKSRFLSQ--VVEDSEPTRNQNFTDLLAELRMAQK 720

Query: 446  VKKSILTANVFDCEQKKLPKIKDPQRPAYNFRRILGITDSRRNQI--LTNKLL---QLVE 610
             K S+L     D ++ K    +D Q    +F ++    D  ++QI  +T + L   +++E
Sbjct: 721  EKDSLLE----DIKRLK----QDKQALEVDFEKMKKERDQAKDQIAYVTGEKLYEIKILE 772

Query: 611  KTSDREVTQ 637
            +T  +E+++
Sbjct: 773  ETHKQEISR 781


>AB023226-1|BAA76853.2| 1345|Homo sapiens KIAA1009 protein protein.
          Length = 1345

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 45/189 (23%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
 Frame = +2

Query: 95   KKHWLVQGKRIPIDTGVEKKLKDMGIEVQDALEFVKGKREEREHI--QIIGPYEQPLPLD 268
            K+ WL  G+     TG  +KLK +  E+Q+    ++G ++E E +  Q+    EQ     
Sbjct: 627  KQRWLHFGEAADPVTG--EKLKQIQKEIQEQETLLQGYQQENERLYNQVKDLQEQN---K 681

Query: 269  KNHPN-YKEKPCLTLNQDNVLLEGLSQAQVLTKTIIAQDKLPPKIEELSRLPAPAAIHEN 445
            KN    +KE   L  ++   L E + +++ L++  + +D  P + +  + L A   + + 
Sbjct: 682  KNEERMFKENQSL-FSEVASLKEQMHKSRFLSQ--VVEDSEPTRNQNFTDLLAELRMAQK 738

Query: 446  VKKSILTANVFDCEQKKLPKIKDPQRPAYNFRRILGITDSRRNQI--LTNKLL---QLVE 610
             K S+L     D ++ K    +D Q    +F ++    D  ++QI  +T + L   +++E
Sbjct: 739  EKDSLLE----DIKRLK----QDKQALEVDFEKMKKERDQAKDQIAYVTGEKLYEIKILE 790

Query: 611  KTSDREVTQ 637
            +T  +E+++
Sbjct: 791  ETHKQEISR 799


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,193,746
Number of Sequences: 237096
Number of extensions: 1906339
Number of successful extensions: 3695
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3693
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)