Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14d21
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    26   0.37 
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   1.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.4  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   7.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 370 NSSRQTS-SKNRRTITTTSSGCYSRKRKK 453
           NS+++T+  K R+T TTT     SRK +K
Sbjct: 784 NSTKETTPKKERKTATTTQPVISSRKEQK 812


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 257 LPLDKNHPNYKEKPCLTLNQDNVLLEGLSQAQVLTKTI 370
           LP+++N P Y    C      + L   L+Q +   K I
Sbjct: 152 LPMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVI 189


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 241 SYNLYVFAFFPFSFYEFKSILNL 173
           +YN+ +    PFS Y F   LNL
Sbjct: 465 AYNVELHNSSPFSIYSFLERLNL 487


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 241 SYNLYVFAFFPFSFYEFKSILNL 173
           +YN+ +    PFS Y F   LNL
Sbjct: 503 AYNVELHNSSPFSIYSFLERLNL 525


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 519 CGSLIFGNFFCSQSKTLAV 463
           CG  +   FFC  S +L++
Sbjct: 49  CGPNVINPFFCDMSPSLSL 67


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 648 TYLFWVTSLSLVFSTSCSNLLVNIW 574
           TY+ ++    L+++ + S   +NIW
Sbjct: 656 TYICYLGKAYLMYAIAGSQCFINIW 680


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,745
Number of Sequences: 438
Number of extensions: 4163
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)