Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14d15
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxid... 100 9e-21
AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18 pro... 100 9e-21
AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18 pro... 100 9e-21
AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens ... 100 9e-21
AM055750-1|CAJ20055.1| 253|Homo sapiens Cox18Hs1 protein protein. 87 4e-17
BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein. 57 5e-08
AM055752-1|CAJ20057.1| 49|Homo sapiens Cox18Hs3 protein protein. 44 5e-04
AM055751-1|CAJ20056.1| 47|Homo sapiens Cox18Hs2 protein protein. 44 5e-04
X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein. 37 0.055
BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c) ... 37 0.055
BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein. 37 0.055
AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein. 37 0.055
>BC101684-1|AAI01685.1| 333|Homo sapiens COX18 cytochrome c oxidase
assembly homolog (S. cerevisiae) protein.
Length = 333
Score = 99.5 bits (237), Expect = 9e-21
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
++ LL H TGLPWW +I+ ST+ +R +T P + YQ+YILAKVEN+ E+K + L
Sbjct: 68 EEVLLGVHAATGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLN 127
Query: 526 KETAIAKKSLNLTDKQCAILYKRSLKKQWVNLIERDNCHPFKA 654
+E A+ L + + + Y +++++ L RDNCHPFKA
Sbjct: 128 QEVAVRANQLGWSKRDARLTYLKNMRRLISELYVRDNCHPFKA 170
>AY957565-1|AAY35061.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 99.5 bits (237), Expect = 9e-21
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
++ LL H TGLPWW +I+ ST+ +R +T P + YQ+YILAKVEN+ E+K + L
Sbjct: 68 EEVLLGVHAATGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLN 127
Query: 526 KETAIAKKSLNLTDKQCAILYKRSLKKQWVNLIERDNCHPFKA 654
+E A+ L + + + Y +++++ L RDNCHPFKA
Sbjct: 128 QEVAVRANQLGWSKRDARLTYLKNMRRLISELYVRDNCHPFKA 170
>AY957564-1|AAY35060.1| 333|Homo sapiens mitochondrial COX18
protein.
Length = 333
Score = 99.5 bits (237), Expect = 9e-21
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
++ LL H TGLPWW +I+ ST+ +R +T P + YQ+YILAKVEN+ E+K + L
Sbjct: 68 EEVLLGVHAATGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLN 127
Query: 526 KETAIAKKSLNLTDKQCAILYKRSLKKQWVNLIERDNCHPFKA 654
+E A+ L + + + Y +++++ L RDNCHPFKA
Sbjct: 128 QEVAVRANQLGWSKRDARLTYLKNMRRLISELYVRDNCHPFKA 170
>AK096310-1|BAC04758.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ38991 fis, clone NT2RI2008622. ).
Length = 333
Score = 99.5 bits (237), Expect = 9e-21
Identities = 42/103 (40%), Positives = 64/103 (62%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
++ LL H TGLPWW +I+ ST+ +R +T P + YQ+YILAKVEN+ E+K + L
Sbjct: 68 EEVLLGVHAATGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLN 127
Query: 526 KETAIAKKSLNLTDKQCAILYKRSLKKQWVNLIERDNCHPFKA 654
+E A+ L + + + Y +++++ L RDNCHPFKA
Sbjct: 128 QEVAVRANQLGWSKRDARLTYLKNMRRLISELYVRDNCHPFKA 170
>AM055750-1|CAJ20055.1| 253|Homo sapiens Cox18Hs1 protein protein.
Length = 253
Score = 87.4 bits (207), Expect = 4e-17
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = +1
Query: 385 PWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLKKETAIAKKSLNLT 564
PWW +I+ ST+ +R +T P + YQ+YILAKVEN+ E+K + L +E A+ L +
Sbjct: 1 PWWGSILLSTVALRGAVTLPLAAYQHYILAKVENLQPEIKTIARHLNQEVAVRANQLGWS 60
Query: 565 DKQCAILYKRSLKKQWVNLIERDNCHPFKA 654
+ + Y +++++ L RDNCHPFKA
Sbjct: 61 KRDARLTYLKNMRRLISELYVRDNCHPFKA 90
>BC071812-1|AAH71812.1| 156|Homo sapiens COX18 protein protein.
Length = 156
Score = 57.2 bits (132), Expect = 5e-08
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKV 480
++ LL H TGLPWW +I+ ST+ +R +T P + YQ+YILAKV
Sbjct: 68 EEVLLGVHAATGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKV 112
>AM055752-1|CAJ20057.1| 49|Homo sapiens Cox18Hs3 protein protein.
Length = 49
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 385 PWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKD 507
PWW +I+ ST+ +R +T P + YQ+YILAK ++S E ++
Sbjct: 1 PWWGSILLSTVALRGAVTLPLAAYQHYILAKA-HLSKEYEE 40
>AM055751-1|CAJ20056.1| 47|Homo sapiens Cox18Hs2 protein protein.
Length = 47
Score = 44.0 bits (99), Expect = 5e-04
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1
Query: 385 PWWAAIVTSTILVRTLMTFPFSIYQNYILAKV 480
PWW +I+ ST+ +R +T P + YQ+YILAK+
Sbjct: 1 PWWGSILLSTVALRGAVTLPLAAYQHYILAKL 32
>X80695-1|CAA56712.1| 435|Homo sapiens OXA1Hs protein.
Length = 435
Score = 37.1 bits (82), Expect = 0.055
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
Q+ L + H GLPWW AI T+ R L+ FP + A++ N E++ + ++
Sbjct: 126 QNLLEFMHVDLGLPWWGAIAACTVFARCLI-FPLIVTGQREAARIHNHLPEIQKFSSRIR 184
Query: 526 K 528
+
Sbjct: 185 E 185
>BC112331-1|AAI12332.1| 496|Homo sapiens oxidase (cytochrome c)
assembly 1-like protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.055
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
Q+ L + H GLPWW AI T+ R L+ FP + A++ N E++ + ++
Sbjct: 186 QNLLEFMHVDLGLPWWGAIAACTVFARCLI-FPLIVTGQREAARIHNHLPEIQKFSSRIR 244
Query: 526 K 528
+
Sbjct: 245 E 245
>BC001669-1|AAH01669.2| 437|Homo sapiens OXA1L protein protein.
Length = 437
Score = 37.1 bits (82), Expect = 0.055
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
Q+ L + H GLPWW AI T+ R L+ FP + A++ N E++ + ++
Sbjct: 128 QNLLEFMHVDLGLPWWGAIAACTVFARCLI-FPLIVTGQREAARIHNHLPEIQKFSSRIR 186
Query: 526 K 528
+
Sbjct: 187 E 187
>AJ001981-1|CAA05127.1| 495|Homo sapiens OXA1L protein.
Length = 495
Score = 37.1 bits (82), Expect = 0.055
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 346 QDALLYYHEVTGLPWWAAIVTSTILVRTLMTFPFSIYQNYILAKVENISLELKDLVNDLK 525
Q+ L + H GLPWW AI T+ R L+ FP + A++ N E++ + ++
Sbjct: 186 QNLLEFMHVDLGLPWWGAIAACTVFARCLI-FPLIVTGQREAARIHNHLPEIQKFSSRIR 244
Query: 526 K 528
+
Sbjct: 245 E 245
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,119,490
Number of Sequences: 237096
Number of extensions: 1210584
Number of successful extensions: 2057
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2057
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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