Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14c18
(611 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 85 7e-19
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 85 7e-19
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.4
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 2.4
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 4.1
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 4.1
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 7.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.5
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 21 9.5
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 84.6 bits (200), Expect = 7e-19
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Frame = +3
Query: 153 MGTWFSYMWWGG-DPDVVNPVSGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPD 329
MGT+ ++ D + ++ +GLT R+ VQ +WA V + A+G ++ F YP+
Sbjct: 1 MGTFLRFLGISSSDDNRIDQATGLTERQKKLVQNTWAVVRKDEVASGIAVMTAFFKKYPE 60
Query: 330 TKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHRRR 509
+ YF P E N +F+AH ++T+LN ++ L+ P ++ A + L E H++R
Sbjct: 61 YQRYFTAFMDTPLNELPANKRFQAHCAGVITALNNVIDFLHDPGLMEASLIGLVERHKKR 120
Query: 510 QIKEKNFHELKEVIVKLFIDVL--RLDDATLSAWGK 611
++ F LKEV++++ L + AW K
Sbjct: 121 GQTKEEFQNLKEVMLEVLRQALGKQYTPEVAEAWNK 156
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 84.6 bits (200), Expect = 7e-19
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 3/156 (1%)
Frame = +3
Query: 153 MGTWFSYMWWGG-DPDVVNPVSGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPD 329
MGT+ ++ D + ++ +GLT R+ VQ +WA V + A+G ++ F YP+
Sbjct: 1 MGTFLRFLGISSSDDNRIDQATGLTERQKKLVQNTWAVVRKDEVASGIAVMTAFFKKYPE 60
Query: 330 TKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHRRR 509
+ YF P E N +F+AH ++T+LN ++ L+ P ++ A + L E H++R
Sbjct: 61 YQRYFTAFMDTPLNELPANKRFQAHCAGVITALNNVIDFLHDPGLMEASLIGLVERHKKR 120
Query: 510 QIKEKNFHELKEVIVKLFIDVL--RLDDATLSAWGK 611
++ F LKEV++++ L + AW K
Sbjct: 121 GQTKEEFQNLKEVMLEVLRQALGKQYTPEVAEAWNK 156
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 296 FTAGCKRVGVDGGP*FLNCVYLSPREPGDRVHHVRIPT 183
+TA C +V G L V++ R G + H IPT
Sbjct: 218 YTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYIPT 255
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.0 bits (47), Expect = 2.4
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -1
Query: 239 VYLSPREPGDRVHHVRIPT-----PPHVAKPGAHDLLVSGF 132
+YLSPR P V+ I T P ++ P +L GF
Sbjct: 25 IYLSPRTPIKNVYKNNIETKNQLSPFNIDTPNRQKILKDGF 65
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 273 NSFATGSELLRRLFNTYPDTKEYF 344
N T E L+ + PD+++YF
Sbjct: 78 NKLPTTPEYNNHLYGSTPDSRDYF 101
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 451 FRLLTAKFNDVIKLMTC 401
FR+L A ND+IK C
Sbjct: 397 FRILIANVNDLIKNTRC 413
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 451 FRLLTAKFNDVIKLMTCA 398
FR+L A N++IK CA
Sbjct: 401 FRILGANVNNLIKNTRCA 418
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/37 (27%), Positives = 14/37 (37%)
Frame = +1
Query: 127 GSKPDTSKSWAPGLATCGGVGIRTW*TRSPGSRGERY 237
G K ++W C G+G+ R P E Y
Sbjct: 764 GCKCYNDRTWNTNAVDCSGLGVEEIPRRIPMDATEVY 800
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 451 FRLLTAKFNDVIKLMTCA 398
FR+L A ND+I CA
Sbjct: 567 FRILGANVNDLIMNTRCA 584
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,723
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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