Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14c04
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 32 0.33
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 32 0.44
U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical pr... 31 0.76
AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical ... 31 0.76
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 30 1.8
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 29 4.1
AF099914-6|AAC68760.3| 213|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81142-1|CAB03502.1| 334|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 28 7.1
U39999-13|AAA81111.1| 320|Caenorhabditis elegans Hypothetical p... 28 7.1
U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical p... 28 7.1
U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical p... 28 7.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 7.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 7.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 7.1
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 27 9.4
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 9.4
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 9.4
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/81 (19%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 79 HVFIAITFMKYSKCYVIE-DSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGT 255
H ++ ++ +C VI + +++ + +K+ EP E+ S ++K + +NG
Sbjct: 353 HAILSERITRFPECLVINLERYQLEGPQFSTKKINCSLEPSFELDISSLQKFPEIEKNGL 412
Query: 256 STTQQKHENETVLREDKEKSC 318
++++ +++ D+ KSC
Sbjct: 413 EQSEKQQDSQYGQLLDRMKSC 433
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/46 (30%), Positives = 30/46 (65%)
Frame = +1
Query: 169 RKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDK 306
RK+E ++ P +++S+ EKP +S +++HE+ET++ E++
Sbjct: 665 RKMERMRAP-TAVTSSKKEKPKNAGSADSSINEEEHEDETMILEEQ 709
>U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical
protein F18F11.3 protein.
Length = 427
Score = 31.1 bits (67), Expect = 0.76
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +1
Query: 136 SGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKS 315
SGK Q +L +KL+ ++P I T I G P + + T V E+ E
Sbjct: 188 SGKCSTQLRLAKKLDFEEKP---IHTFNITAKDGDPHSNRTHTVAHTVTIHVKNENDEPP 244
Query: 316 CLTLFFDQVAKIFKHLFYGDV 378
F QV IFK GD+
Sbjct: 245 KFLTDFSQVFPIFKSTKPGDI 265
>AF125463-4|AAD12862.1| 243|Caenorhabditis elegans Hypothetical
protein Y49F6C.5 protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.76
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 208 STSQIEKPIGVPENGTSTTQQKHE--NETVLR-EDKEKSCLTLFFDQVAKIFKHLFYGDV 378
+T +I K IG+P + + E ++ +L ED++ L F + FK LF+G
Sbjct: 92 ATVKITKMIGIPRKKLKSFDESVEEFSDVILAVEDEKFYVLKKFLASHSSYFKSLFFGSF 151
Query: 379 EKPSNSRIELLESDFA 426
+ S I L E + A
Sbjct: 152 AEAEKSEITLSEINSA 167
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 538 YHGRLKEETKEALKCPEGYIMTPNGCTVRNSKMIISVPNQCP 663
YHGR+ +K P ++TPNG N K+ +S+ P
Sbjct: 58 YHGRIIFPADYPMKPPNLILLTPNGRFELNKKVCLSISGYHP 99
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +1
Query: 142 KVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENETVLREDKEKSCL 321
+VD +L+ K ++ K E + P+G + T E E +E KE+
Sbjct: 1208 RVDYLLKLMSKDKVKTTEKKERKRKADDVPVGPEKKKRHTNNVPQEGEKKKKEKKEEKNS 1267
Query: 322 TLFFDQVA--KIFKHLFYGDVEKPS 390
+ DQ+A I K L+ G +E S
Sbjct: 1268 SSLKDQLALLSIDKSLYGGALEDSS 1292
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 194 GSCKISNFLNSCFCASTFP-ESSMT*HFEYFI 102
G+C +SN N+CF AS F S+M EYF+
Sbjct: 273 GACGLSNLGNTCFMASAFQCLSNMPPLREYFL 304
>AF099914-6|AAC68760.3| 213|Caenorhabditis elegans Hypothetical
protein C40A11.2 protein.
Length = 213
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 463 WISPLKFHYRWLLQNPIREVQF*NC 389
W SP F+++++L+NP +V F C
Sbjct: 139 WNSPESFNFQYVLENPKLDVYFKQC 163
>Z81142-1|CAB03502.1| 334|Caenorhabditis elegans Hypothetical
protein ZK1037.3 protein.
Length = 334
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -1
Query: 654 IRHRYNHFRISHGTTIGRHYVSF----RTFQCFFSLFFQSTVIPRLEDFHFSVRVSQVES 487
+ H YN+ ++ GTTI Y++F T F S F + L+ F FS S
Sbjct: 206 LAHTYNNALVTCGTTILYGYLAFLVIKNTDSTFSSKFSNYQITILLQAFFFS--FFHAAS 263
Query: 486 VGKYVVM 466
G YV M
Sbjct: 264 AGLYVYM 270
>Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical
protein F59F4.3 protein.
Length = 494
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = -1
Query: 285 FIFMFLLRCACSVFWHSNWFF--YLRCRYFIFW 193
F+F F R + H NW Y C YF W
Sbjct: 8 FLFWFSYRLTLACLAHFNWCMSIYTNCVYFTLW 40
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/88 (26%), Positives = 42/88 (47%)
Frame = +1
Query: 100 FMKYSKCYVIEDSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHE 279
+ + +K +E S K D +++ LR+ E + K + T +I +P ST Q+HE
Sbjct: 628 YARLAKSQEVEQSSKKDWEREELRRAEKM---KKKGRTVEIIEP-------NSTILQEHE 677
Query: 280 NETVLREDKEKSCLTLFFDQVAKIFKHL 363
+ V E + F ++K+F +L
Sbjct: 678 HNFVGSVITENEEQKISFSGISKLFNYL 705
>U39999-13|AAA81111.1| 320|Caenorhabditis elegans Hypothetical
protein F41G3.2 protein.
Length = 320
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 13/70 (18%)
Frame = +1
Query: 409 LESDFAVTNDSGTSREISNHHDIFPNR-----------FDLTDPNAEVEIFEPRYHGRLK 555
LE F D+G SRE SN+ F + DPN+ EI +PR +K
Sbjct: 13 LEDQFTKNADTGNSRERSNNGGRFVKKSAAALIAKKQGMQTEDPNSATEIIDPRIAEEIK 72
Query: 556 --EETKEALK 579
+ +E LK
Sbjct: 73 NLRDREEELK 82
>U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical
protein T26A5.2b protein.
Length = 641
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +1
Query: 127 IEDSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENET---VLR 297
+E + K++A ++ ++ + PK + ++EK + + T T +QK + ET + R
Sbjct: 409 VEKNVKLEAPEKQNKRKDTALNPKEKYCAQKLEKQLN---DQTKTPKQKPKQETSAGIKR 465
Query: 298 EDKEKSCL 321
E ++ C+
Sbjct: 466 ESTQRPCV 473
>U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical
protein T26A5.2a protein.
Length = 779
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +1
Query: 127 IEDSGKVDAQKQLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHENET---VLR 297
+E + K++A ++ ++ + PK + ++EK + + T T +QK + ET + R
Sbjct: 547 VEKNVKLEAPEKQNKRKDTALNPKEKYCAQKLEKQLN---DQTKTPKQKPKQETSAGIKR 603
Query: 298 EDKEKSCL 321
E ++ C+
Sbjct: 604 ESTQRPCV 611
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 169 RKLEILQEPKNEISTSQIEKPI--GVPENGTSTTQQKHENETVLREDKE 309
++LE+ EPK T +EK + ++ S T++ E + ++++ K+
Sbjct: 10138 QQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEPKEKKKIIKKKKD 10186
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 169 RKLEILQEPKNEISTSQIEKPI--GVPENGTSTTQQKHENETVLREDKE 309
++LE+ EPK T +EK + ++ S T++ E + ++++ K+
Sbjct: 10158 QQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEPKEKKKIIKKKKD 10206
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 169 RKLEILQEPKNEISTSQIEKPI--GVPENGTSTTQQKHENETVLREDKE 309
++LE+ EPK T +EK + ++ S T++ E + ++++ K+
Sbjct: 10158 QQLEVKSEPKKSDKTETVEKEVASSTEKSDDSKTKEPKEKKKIIKKKKD 10206
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 136 SGKVDAQKQLLRKLEILQEPKNEI 207
SGK++A KQLL + EI + P E+
Sbjct: 1284 SGKMEALKQLLIECEICKNPDEEV 1307
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 136 SGKVDAQKQLLRKLEILQEPKNEI 207
SGK++A KQLL + EI + P E+
Sbjct: 1284 SGKMEALKQLLIECEICKNPDEEV 1307
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.5 bits (58), Expect = 9.4
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Frame = +1
Query: 127 IEDSGKVDAQK--QLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHE-NE-TVL 294
++D+ KV +LL+ + ++E KN+ T +E V G Q +H+ NE +
Sbjct: 2125 LKDAAKVMVSNVARLLKTVATVEE-KNQQGTRAVEA--AVDAIGFEMKQFEHDLNEGAAI 2181
Query: 295 REDKEKSCLTLFFDQVAKIFKHLFYG-DVEKPSNSRIELLE-SDFAVTNDSGTSREISNH 468
D L + V++I K + G D + I + S AV + R ISN
Sbjct: 2182 PTDFRPEHLQQTAEHVSEITKRVMQGADAPQSEEEIIGVANLSRSAVRSLLAVVRTISND 2241
Query: 469 HDIFPNRFDLTDPNAEV 519
D P R+ + D +V
Sbjct: 2242 ADTAPQRYAVLDSGRDV 2258
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.5 bits (58), Expect = 9.4
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Frame = +1
Query: 127 IEDSGKVDAQK--QLLRKLEILQEPKNEISTSQIEKPIGVPENGTSTTQQKHE-NE-TVL 294
++D+ KV +LL+ + ++E KN+ T +E V G Q +H+ NE +
Sbjct: 2125 LKDAAKVMVSNVARLLKTVATVEE-KNQQGTRAVEA--AVDAIGFEMKQFEHDLNEGAAI 2181
Query: 295 REDKEKSCLTLFFDQVAKIFKHLFYG-DVEKPSNSRIELLE-SDFAVTNDSGTSREISNH 468
D L + V++I K + G D + I + S AV + R ISN
Sbjct: 2182 PTDFRPEHLQQTAEHVSEITKRVMQGADAPQSEEEIIGVANLSRSAVRSLLAVVRTISND 2241
Query: 469 HDIFPNRFDLTDPNAEV 519
D P R+ + D +V
Sbjct: 2242 ADTAPQRYAVLDSGRDV 2258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,513,405
Number of Sequences: 27780
Number of extensions: 335846
Number of successful extensions: 1233
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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