Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14b14
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical pr...   175   2e-44
Z79598-4|CAB01868.2|  745|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical ...    29   2.5  

>Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical
           protein F26H9.5 protein.
          Length = 370

 Score =  175 bits (427), Expect = 2e-44
 Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
 Frame = +3

Query: 120 NFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDVPD 299
           NF AGPAKLPEEV   ++ E  NF N G+S++E SHRS  +  L  E   ++R L++VPD
Sbjct: 9   NFAAGPAKLPEEVLLKMQEEQLNFNNLGVSVIEMSHRSKEFGALLNETISLIRELMNVPD 68

Query: 300 NYKVXXXXXXXXXXXXXVPLNLISRTGTADYVVTGAWSXXXXXXXXXYGKVNLVLPPTDK 479
           N+++             +PLNL      ADY+VTGAWS         Y  V  V  P+  
Sbjct: 69  NFEILFMQGGGTGQFAAIPLNLKGDHEHADYIVTGAWSSKAADEAGKYINVKKVFQPSKP 128

Query: 480 YEDIPDQTKWNLDPNASYVHICTNETIHGVEF-DFIPDTKGVPLIADMSSNIMSKKVDVS 656
           Y  +PDQ  W  D  A+Y++ C NET+HG+EF    P++  VPL+AD+SSN M++  D  
Sbjct: 129 YVTVPDQENWVHDEKAAYLYYCANETVHGIEFTPTAPESHNVPLVADVSSNFMARPFDFK 188

Query: 657 KFGVIYAGAQKNIGTSGV 710
             GV++ GAQKN+G +G+
Sbjct: 189 DHGVVFGGAQKNLGAAGL 206


>Z79598-4|CAB01868.2|  745|Caenorhabditis elegans Hypothetical
           protein C44H4.4 protein.
          Length = 745

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = +3

Query: 471 TDKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVD 650
           TD++ D+ +Q    L    +  HICT+     +E D  P TKG P + D+S N +   +D
Sbjct: 587 TDEHSDVKNQ----LINGLNKFHICTSPV--WIEIDHGPQTKGFPFLHDVSFNGI-LAID 639

Query: 651 VSKFGVIYAGAQ 686
             K  V+   A+
Sbjct: 640 KDKVNVLVEPAE 651


>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 588 DTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNI 695
           D + +  +A+  SN  SKK    ++G +YAG  +N+
Sbjct: 566 DKREITFLAEGDSNPHSKKTQKDRYGQLYAGITENL 601


>AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical
           protein T05E7.3 protein.
          Length = 997

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -1

Query: 143 FSRSSAKIKHFRHFHLFIYLINSYTTLFYQTTLSFSDVSRYDVVLS 6
           F+RSS +++      LFI + N   + F +++LS+ DV     VLS
Sbjct: 717 FARSSGELEKNYIAELFIKITNPKASRFSESSLSWKDVKMSKTVLS 762


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,876,832
Number of Sequences: 27780
Number of extensions: 327583
Number of successful extensions: 902
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)