Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14b13
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical pr... 40 0.001
U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical pr... 40 0.001
AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin re... 40 0.001
AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin re... 40 0.001
U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical pr... 36 0.020
AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin re... 36 0.020
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 31 1.0
AC006673-12|AAF39921.1| 494|Caenorhabditis elegans Cytochrome p... 29 2.3
Z68220-7|CAI79220.1| 260|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68220-6|CAA92486.3| 293|Caenorhabditis elegans Hypothetical pr... 29 3.1
U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily ass... 29 3.1
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 28 5.4
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 28 5.4
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 28 5.4
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 28 5.4
U97008-9|AAB52314.2| 434|Caenorhabditis elegans Cytochrome p450... 28 7.1
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 28 7.1
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 28 7.1
Z34533-6|CAA84300.2| 371|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 27 9.4
U97008-10|AAB52315.2| 494|Caenorhabditis elegans Cytochrome p45... 27 9.4
AY158690-1|AAN41642.1| 371|Caenorhabditis elegans choline kinas... 27 9.4
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 27 9.4
>U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical
protein C13B9.4c protein.
Length = 541
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 268 RNANLTEYYCPAYFDGLLCWNPTPSHTVAVQKCFKEFFGIKYDETQNASRLC-LDGVW 438
R+ N T +C A +D +LCW PTP+++ +C G+ D +N ++ C + GVW
Sbjct: 65 RDPNDTRIWCNATYDTVLCWPPTPANSSVTLQC-PHMKGL--DPNKNITKDCHVSGVW 119
>U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical
protein C13B9.4a protein.
Length = 546
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 268 RNANLTEYYCPAYFDGLLCWNPTPSHTVAVQKCFKEFFGIKYDETQNASRLC-LDGVW 438
R+ N T +C A +D +LCW PTP+++ +C G+ D +N ++ C + GVW
Sbjct: 65 RDPNDTRIWCNATYDTVLCWPPTPANSSVTLQC-PHMKGL--DPNKNITKDCHVSGVW 119
>AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1C protein.
Length = 546
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 268 RNANLTEYYCPAYFDGLLCWNPTPSHTVAVQKCFKEFFGIKYDETQNASRLC-LDGVW 438
R+ N T +C A +D +LCW PTP+++ +C G+ D +N ++ C + GVW
Sbjct: 65 RDPNDTRIWCNATYDTVLCWPPTPANSSVTLQC-PHMKGL--DPNKNITKDCHVSGVW 119
>AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1B protein.
Length = 541
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 268 RNANLTEYYCPAYFDGLLCWNPTPSHTVAVQKCFKEFFGIKYDETQNASRLC-LDGVW 438
R+ N T +C A +D +LCW PTP+++ +C G+ D +N ++ C + GVW
Sbjct: 65 RDPNDTRIWCNATYDTVLCWPPTPANSSVTLQC-PHMKGL--DPNKNITKDCHVSGVW 119
>U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical
protein C13B9.4b protein.
Length = 536
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 268 RNANLTEYYCPAYFDGLLCWNPTPSHTVAVQKC 366
R+ N T +C A +D +LCW PTP+++ +C
Sbjct: 65 RDPNDTRIWCNATYDTVLCWPPTPANSSVTLQC 97
>AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1A protein.
Length = 536
Score = 36.3 bits (80), Expect = 0.020
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 268 RNANLTEYYCPAYFDGLLCWNPTPSHTVAVQKC 366
R+ N T +C A +D +LCW PTP+++ +C
Sbjct: 65 RDPNDTRIWCNATYDTVLCWPPTPANSSVTLQC 97
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 337 PSHTVAVQKCFKEFFGIKYDETQNASRL 420
P A+QKC KEF+G E+++ SR+
Sbjct: 258 PKFVAAIQKCLKEFYGGNAKESKDYSRV 285
>AC006673-12|AAF39921.1| 494|Caenorhabditis elegans Cytochrome p450
family protein 35A3 protein.
Length = 494
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 380 LE*NTMKHKTLLVCVWTVFGRTTPTTRIARSGSLMCHP 493
L+ NT KT+LV +W TT TT + L+ HP
Sbjct: 288 LDFNTETLKTMLVDLWLTGQETTTTTLTSGFNQLLLHP 325
>Z68220-7|CAI79220.1| 260|Caenorhabditis elegans Hypothetical
protein T20D3.3b protein.
Length = 260
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 287 SVRLAFLAKHSVLAVAFSITLSAL-SKVCKSSSLPLKMYYQLRIAAKSALVCSLASLINT 111
S+ L FL+ + + V F + L +K S LP YQ AL+C L
Sbjct: 79 SISLQFLSYYESILVDFGDQIQFLRTKAFLLSKLPFTSNYQKEFKNTMALLCQLCGSFEN 138
Query: 110 QSLFD 96
LF+
Sbjct: 139 WQLFE 143
>Z68220-6|CAA92486.3| 293|Caenorhabditis elegans Hypothetical
protein T20D3.3a protein.
Length = 293
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 287 SVRLAFLAKHSVLAVAFSITLSAL-SKVCKSSSLPLKMYYQLRIAAKSALVCSLASLINT 111
S+ L FL+ + + V F + L +K S LP YQ AL+C L
Sbjct: 112 SISLQFLSYYESILVDFGDQIQFLRTKAFLLSKLPFTSNYQKEFKNTMALLCQLCGSFEN 171
Query: 110 QSLFD 96
LF+
Sbjct: 172 WQLFE 176
>U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 226 protein.
Length = 560
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 423 SGRCLAELHRLLE-LHGADR*CVTHGRG-QSHILDGILSQSRRFI 551
+ RCL E HR+++ L GAD +G H L ++ R F+
Sbjct: 438 AARCLIEAHRIMDYLFGADHFLSKQTKGFMDHALSSLMQFQRNFV 482
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 244 TARTECLARNANLTEYYCPAYFDGLLCWN 330
+A+ + N T+ CPAY DG LC N
Sbjct: 25 SAKCQNFGTPLNSTDCKCPAYVDGKLCEN 53
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 353 PSRNALKNFLE*NTMKHKTLLV-CVWTVFG 439
P RNAL ++ N +K+KT+++ C+ + G
Sbjct: 494 PMRNALSEMIDLNLLKNKTMMILCISNLLG 523
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 353 PSRNALKNFLE*NTMKHKTLLV-CVWTVFG 439
P RNAL ++ N +K+KT+++ C+ + G
Sbjct: 439 PMRNALSEMIDLNLLKNKTMMILCISNLLG 468
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 353 PSRNALKNFLE*NTMKHKTLLV-CVWTVFG 439
P RNAL ++ N +K+KT+++ C+ + G
Sbjct: 494 PMRNALSEMIDLNLLKNKTMMILCISNLLG 523
>U97008-9|AAB52314.2| 434|Caenorhabditis elegans Cytochrome p450
family protein 35A1 protein.
Length = 434
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 314 DCCVGTRRRATRSPSRNALKNFLE*NTMKHKTLLVCVWTVFGRTTPTTRIARSGSLMCHP 493
D + T+ A R + A+K+ T+K T+++ +W TT TT I+ L+ HP
Sbjct: 203 DMMMTTQNTAKRFAAAEAVKSI---ETLK--TMIIDLWMTGQETTTTTLISGFTQLLLHP 257
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 27.9 bits (59), Expect = 7.1
Identities = 32/132 (24%), Positives = 45/132 (34%), Gaps = 18/132 (13%)
Frame = +1
Query: 295 CPAYFDGLLCWNPTPSHTVAVQKCFKEFFGI-----KYDETQNASRLCLD-GVWQ--NYT 450
C FD LCW + C F + + SR C GVWQ NYT
Sbjct: 28 CSVDFDKSLCWASAHIGQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCNSMGVWQDSNYT 87
Query: 451 -------DYSNCTERIANVSPT---DVASLIYLTGXXXXXXXXXXXXXXXXXXKDLRCLR 600
+Y+ C + V P D+ + LT ++C R
Sbjct: 88 MCIKVVEEYAQCLQGFCRVCPDVLRDLVISVSLTLSFVSVILLVAAIVLFSIFDSIQCRR 147
Query: 601 NTIHTNLMTTYI 636
+IH NL T ++
Sbjct: 148 LSIHKNLATAFV 159
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 27.9 bits (59), Expect = 7.1
Identities = 32/132 (24%), Positives = 45/132 (34%), Gaps = 18/132 (13%)
Frame = +1
Query: 295 CPAYFDGLLCWNPTPSHTVAVQKCFKEFFGI-----KYDETQNASRLCLD-GVWQ--NYT 450
C FD LCW + C F + + SR C GVWQ NYT
Sbjct: 28 CSVDFDKSLCWASAHIGQQMTRDCPFTFCTAIPGCEEIKDRYMVSRNCNSMGVWQDSNYT 87
Query: 451 -------DYSNCTERIANVSPT---DVASLIYLTGXXXXXXXXXXXXXXXXXXKDLRCLR 600
+Y+ C + V P D+ + LT ++C R
Sbjct: 88 MCIKVVEEYAQCLQGFCRVCPDVLRDLVISVSLTLSFVSVILLVAAIVLFSIFDSIQCRR 147
Query: 601 NTIHTNLMTTYI 636
+IH NL T ++
Sbjct: 148 LSIHKNLATAFV 159
>Z34533-6|CAA84300.2| 371|Caenorhabditis elegans Hypothetical
protein B0285.8 protein.
Length = 371
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -3
Query: 375 FFKAFLDGDRVARRRVPTQQSIKICRAVVFCEISVP 268
F +A++D D + RVP+ + +++ + C+ P
Sbjct: 282 FCEAYVDADNKLKNRVPSNRDLEVSNLICECQFFWP 317
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 208 TLESAESVIENATARTECLARNANLTE 288
T ESA+ V N T TECL+++ L E
Sbjct: 82 TTESAKKVENNPTECTECLSKSGALIE 108
>U97008-10|AAB52315.2| 494|Caenorhabditis elegans Cytochrome p450
family protein 35A2 protein.
Length = 494
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 404 KTLLVCVWTVFGRTTPTTRIARSGSLMCHP 493
KT+++ +W TT TT I+ L+ HP
Sbjct: 296 KTMIIDLWMTGQETTTTTLISGFNQLLLHP 325
>AY158690-1|AAN41642.1| 371|Caenorhabditis elegans choline kinase
CKB-1 protein.
Length = 371
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -3
Query: 375 FFKAFLDGDRVARRRVPTQQSIKICRAVVFCEISVP 268
F +A++D D + RVP+ + +++ + C+ P
Sbjct: 282 FCEAYVDADNKLKNRVPSNRDLEVSNLICECQFFWP 317
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = +1
Query: 271 NANLTEYYCPAYFDGLL--CWNPTPSHTVAVQKCFKEFFGIKYDE-TQNASR 417
N N YCP L+ CW +P ++C K F +E QN R
Sbjct: 239 NRNAQPKYCPDEIYKLMKMCWKTSPKKRPTFKECVKFFKNYMQEEVVQNIER 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,204,104
Number of Sequences: 27780
Number of extensions: 309552
Number of successful extensions: 856
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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