Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14b09
(784 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL050318-10|CAB75367.1| 129|Homo sapiens chromosome 20 open rea... 120 6e-27
AF112213-1|AAF17201.1| 129|Homo sapiens putative Rab5-interacti... 120 6e-27
BC001871-1|AAH01871.1| 137|Homo sapiens C20orf24 protein protein. 105 1e-22
AL050318-9|CAI23511.1| 137|Homo sapiens chromosome 20 open read... 105 1e-22
S83364-1|AAB50849.1| 122|Homo sapiens putative Rab5-interacting... 89 2e-17
AF274936-1|AAK07515.1| 131|Homo sapiens PNAS-11 protein. 86 2e-16
BC004446-1|AAH04446.1| 87|Homo sapiens C20orf24 protein protein. 47 9e-05
AL050318-11|CAI23512.2| 143|Homo sapiens chromosome 20 open rea... 47 9e-05
>AL050318-10|CAB75367.1| 129|Homo sapiens chromosome 20 open
reading frame 24 protein.
Length = 129
Score = 120 bits (289), Expect = 6e-27
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = +2
Query: 146 SIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVILNAAVI 325
S+W K L ++ W DK+EFLDVIYW RQ F ++NA V+
Sbjct: 23 SVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVL 82
Query: 326 YVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLH 460
Y+Y +N+ IDEEEYGG WE+TKEGFMTSFA F+V WII YT +H
Sbjct: 83 YLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWIIFYTAIH 127
>AF112213-1|AAF17201.1| 129|Homo sapiens putative Rab5-interacting
protein protein.
Length = 129
Score = 120 bits (289), Expect = 6e-27
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = +2
Query: 146 SIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVILNAAVI 325
S+W K L ++ W DK+EFLDVIYW RQ F ++NA V+
Sbjct: 23 SVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVL 82
Query: 326 YVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLH 460
Y+Y +N+ IDEEEYGG WE+TKEGFMTSFA F+V WII YT +H
Sbjct: 83 YLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWIIFYTAIH 127
>BC001871-1|AAH01871.1| 137|Homo sapiens C20orf24 protein protein.
Length = 137
Score = 105 bits (253), Expect = 1e-22
Identities = 49/109 (44%), Positives = 63/109 (57%)
Frame = +2
Query: 146 SIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVILNAAVI 325
S+W K L ++ W DK+EFLDVIYW RQ F ++NA V+
Sbjct: 23 SVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVL 82
Query: 326 YVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLHSEKL 472
Y+Y +N+ IDEEEYGG WE+TKEGFMTSFA F+V +T H + L
Sbjct: 83 YLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVCVADSFTTGHLDHL 131
>AL050318-9|CAI23511.1| 137|Homo sapiens chromosome 20 open reading
frame 24 protein.
Length = 137
Score = 105 bits (253), Expect = 1e-22
Identities = 49/109 (44%), Positives = 63/109 (57%)
Frame = +2
Query: 146 SIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVILNAAVI 325
S+W K L ++ W DK+EFLDVIYW RQ F ++NA V+
Sbjct: 23 SVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVL 82
Query: 326 YVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLHSEKL 472
Y+Y +N+ IDEEEYGG WE+TKEGFMTSFA F+V +T H + L
Sbjct: 83 YLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVCVADSFTTGHLDHL 131
>S83364-1|AAB50849.1| 122|Homo sapiens putative Rab5-interacting
protein protein.
Length = 122
Score = 88.6 bits (210), Expect = 2e-17
Identities = 39/79 (49%), Positives = 47/79 (59%)
Frame = +2
Query: 182 WPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVILNAAVIYVYVNNFHNIDE 361
W DK+EFLDVIYW RQ F ++NA V+Y+Y +N+ IDE
Sbjct: 21 WEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDE 80
Query: 362 EEYGGMWEITKEGFMTSFA 418
EEYGG WE+TKEGFM SFA
Sbjct: 81 EEYGGQWELTKEGFMPSFA 99
>AF274936-1|AAK07515.1| 131|Homo sapiens PNAS-11 protein.
Length = 131
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +2
Query: 146 SIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVILNAAVI 325
S+W K L ++ W DK+EFLDVIYW RQ F ++NA V+
Sbjct: 23 SVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIWGVLPLRGFLGIAGFCLINAGVL 82
Query: 326 YVYVNNFHNIDEEE-YGGMWEITKEGFMTSFAGFLV 430
Y+Y +N+ IDE WE+TKEGFMTSFA F+V
Sbjct: 83 YLYFSNYLQIDEGRILVARWELTKEGFMTSFALFMV 118
>BC004446-1|AAH04446.1| 87|Homo sapiens C20orf24 protein protein.
Length = 87
Score = 46.8 bits (106), Expect = 9e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 146 SIWKKALDKNSEWPDKEEFLDVIYWMRQ 229
S+W K L ++ W DK+EFLDVIYW RQ
Sbjct: 23 SVWSKVLRSDAAWEDKDEFLDVIYWFRQ 50
>AL050318-11|CAI23512.2| 143|Homo sapiens chromosome 20 open
reading frame 24 protein.
Length = 143
Score = 46.8 bits (106), Expect = 9e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 146 SIWKKALDKNSEWPDKEEFLDVIYWMRQ 229
S+W K L ++ W DK+EFLDVIYW RQ
Sbjct: 23 SVWSKVLRSDAAWEDKDEFLDVIYWFRQ 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,592,732
Number of Sequences: 237096
Number of extensions: 2230143
Number of successful extensions: 11421
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11413
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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