Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14b09
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   7.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.8  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 196 RIFRRNILDAPGYRNHFGTILG 261
           R++   ++   GY+N  GTI+G
Sbjct: 184 RVWNHQLISYAGYKNPDGTIIG 205


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -2

Query: 378 IPPYSSSSMLWKLFTYTYITAAFKMTNNSSPRNPF 274
           IP + SS  LW  +  + +      T N   R PF
Sbjct: 404 IPAFLSSLFLWLGYCNSLLNPIIYATLNRDFRKPF 438


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -2

Query: 372 PYSSSSMLWKLFTYTYITAAFKMTNNSSPRN 280
           PYS S   W + +Y  I     +   S  +N
Sbjct: 64  PYSGSKCTWTITSYHRINLKCSLVEFSENKN 94


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 80  NKTIMSTKAKQTDNINKNK 136
           N  IM+T+   +DN N N+
Sbjct: 575 NDLIMNTRCANSDNQNNNQ 593


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,449
Number of Sequences: 438
Number of extensions: 4745
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)