Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14b08
(199 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 25 0.086
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 0.61
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 2.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 2.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 2.4
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 19 4.3
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 19 4.3
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 19 4.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 19 4.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 19 4.3
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 19 5.7
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 19 5.7
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 25.0 bits (52), Expect = 0.086
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 129 LIGFILVFK*ITVTKLIRITICTIDKILSSP 37
L+G L+F I VT I IT+C ++ SP
Sbjct: 311 LLGKYLLFTMILVTLSIWITVCVLNVHFRSP 341
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 0.61
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 141 ITKTLIGFILVFK*ITVTKLIRITICTIDKILSSP 37
+T L+G L+F + VT + +TI ++ SP
Sbjct: 294 LTVPLLGKYLLFTMVLVTLSVVVTIAVLNVNFRSP 328
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 2.4
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 13 CCLLCVVLWTT 45
CC+L +V W +
Sbjct: 252 CCMLVIVSWVS 262
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 2.4
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 13 CCLLCVVLWTT 45
CC+L +V W +
Sbjct: 252 CCMLVIVSWVS 262
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 61 RTNRNSN*FSYSDLFKYQYKTN 126
+T N+N + Y+ KY Y N
Sbjct: 88 KTIHNNNNYKYNYNNKYNYNNN 109
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization
protein protein.
Length = 250
Score = 19.4 bits (38), Expect = 4.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 56 TKYSVVHKTTHNKQQK 9
TK S +TTHN+ +K
Sbjct: 43 TKKSQGSRTTHNELEK 58
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 19.4 bits (38), Expect = 4.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 97 DLFKYQYKTNKCF 135
D +Y Y+ NKC+
Sbjct: 122 DNCEYAYRFNKCY 134
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 19.4 bits (38), Expect = 4.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 76 NYDLYDRQNTQ*SIKQHIIN 17
NY+ Y+ N + K +IIN
Sbjct: 93 NYNNYNNYNKKLYYKNYIIN 112
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 4.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 129 LIGFILVFK*ITVTKLIRITICTIDKILSSP 37
L+G L+F I V+ I +T+ ++ SP
Sbjct: 306 LLGKYLIFAMILVSISICVTVVVLNVHFRSP 336
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 4.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 129 LIGFILVFK*ITVTKLIRITICTIDKILSSP 37
L+G L+F I V+ I +T+ ++ SP
Sbjct: 306 LLGKYLIFAMILVSISICVTVVVLNVHFRSP 336
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 19.0 bits (37), Expect = 5.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 6 EFLLFIMCCFMDY*VFCL 59
E L FI+ +DY + CL
Sbjct: 53 EILQFILDVRLDYRISCL 70
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 19.0 bits (37), Expect = 5.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 6 EFLLFIMCCFMDY*VFCL 59
E L FI+ +DY + CL
Sbjct: 21 EILQFILDVRLDYRISCL 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,105
Number of Sequences: 438
Number of extensions: 497
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2668491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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