Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt14b03
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0058 + 440328-440437,440514-440733,441605-441805,441915-44... 188 3e-48
04_04_0790 + 28083116-28083337,28083446-28083652,28083739-280838... 118 6e-27
09_04_0503 - 18170645-18170858,18171029-18171222,18171419-181716... 33 0.28
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 31 0.64
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201... 29 2.6
03_02_0331 - 7527010-7529352 29 3.4
11_06_0743 + 26847652-26849424 29 4.5
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 4.5
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 29 4.5
11_06_0669 - 26084906-26087350 28 6.0
02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038 28 6.0
09_04_0355 + 16922863-16924224 28 7.9
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 28 7.9
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 28 7.9
>01_01_0058 +
440328-440437,440514-440733,441605-441805,441915-441985,
442058-442217,444166-444492,444529-444759,444869-445249,
445573-445648,445736-445799,446334-446469,447666-447710,
447851-447916
Length = 695
Score = 188 bits (459), Expect = 3e-48
Identities = 81/154 (52%), Positives = 111/154 (72%)
Frame = +2
Query: 197 YPAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDACPVQKSINE 376
YP RRD +VVD YHG + DPYRWLEDP+S +TKEFV +Q ++ L C ++++
Sbjct: 13 YPPTRRDNSVVDMYHGVPVADPYRWLEDPESEDTKEFVASQVELAESVLAGCFDRENLRR 72
Query: 377 RLTELWNYPKYSCPFRKGSRYFFFKNTGLQNQNALYVQDGLDGEPRVFLDPNTLSEDGTV 556
+T L+++P++ PFR+G++YF+F N+GLQ Q+ LYVQD LDGE V LDPN LS+DGTV
Sbjct: 73 EVTRLFDHPRHGAPFRRGNKYFYFHNSGLQAQSVLYVQDSLDGEAEVLLDPNALSKDGTV 132
Query: 557 ALSGTKFTEDGSTLAYGLSASGSDWIAIHFKDVA 658
ALS ++DG +AYGLS SGSDW+ I ++A
Sbjct: 133 ALSTYSVSKDGKYIAYGLSESGSDWVTIRVMNIA 166
>04_04_0790 +
28083116-28083337,28083446-28083652,28083739-28083809,
28083898-28084063,28084189-28084788,28084928-28085323
Length = 553
Score = 118 bits (283), Expect = 6e-27
Identities = 58/126 (46%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
Frame = +2
Query: 272 LEDPDSNETKEFVEAQNKITRPYLDACPVQK-SINERLTELWNYPKYSCPFRKGSRYFFF 448
+E+ +S E K FV+AQ + L C + + +LT L+++P+Y PF++ YF+
Sbjct: 1 MEELESEEVKGFVDAQAAVAEAVLSTCDDHRVRLRGQLTALFDHPRYRAPFKRAGSYFYL 60
Query: 449 KNTGLQNQNALYVQDGLDG--EPRVFLDPNTLSEDGTVALSGTKFTEDGSTLAYGLSASG 622
N GLQ +ALYVQ GL G EP V LDPNT S+D TV+L+ + DG LAYG SASG
Sbjct: 61 HNPGLQPHSALYVQHGLGGGEEPDVLLDPNTFSDDATVSLAMFGVSHDGEHLAYGTSASG 120
Query: 623 SDWIAI 640
SDW+ I
Sbjct: 121 SDWVTI 126
>09_04_0503 -
18170645-18170858,18171029-18171222,18171419-18171629,
18172162-18172553,18172926-18173054,18173353-18173487,
18173885-18174088,18174716-18174771,18174793-18174950,
18175864-18176231
Length = 686
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +2
Query: 200 PAVRRDETVVDDYHGTKIKDPYRWLEDPDSNETKEFVEAQNKITRPYLDA 349
P V + HG DPY W+ D + +EA+N ++D+
Sbjct: 40 PPVAKKVPFTASAHGRSWSDPYHWMRDTSDPDLAALLEAENAYADAFVDS 89
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -3
Query: 661 GGNVFEMYSYPIRAAGRKSVRQGGS-VFGELGTGKRHRAVFGQSVRVQEDAR 509
GG F Y P +G R GG +GE G+G RHR G+ D R
Sbjct: 67 GGGRFHPYRGPSDHSGGGGYRSGGGGEYGEPGSGPRHRYGSGRGDHSDHDNR 118
>07_03_1503 + 27017933-27018063,27019668-27019727,27019996-27020101,
27020254-27020325,27021008-27021061,27021707-27021856,
27022206-27022547,27022651-27024684,27024706-27024947,
27025658-27026235,27026329-27028183,27028533-27028851,
27028980-27029417
Length = 2126
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 335 PYLDACPVQKSINERLTELWNYPKYSCPFRKG-SRYFFFKNTGLQNQNALYVQDGLDGEP 511
P + P Q S+ L+ L + S P +KG S + N ++N+ A QD P
Sbjct: 2010 PCISCQPPQLSL-AALSPLQSGTSTSGPQQKGNSTSWVPTNVSIRNKAAFATQD-----P 2063
Query: 512 RVFLDPNTLSEDGTVALSGTKFTEDGSTLA 601
+ +DP TL EDGT S + + S +A
Sbjct: 2064 EMEVDPWTLLEDGTSCPSMSSGSNSSSGMA 2093
>03_02_0331 - 7527010-7529352
Length = 780
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 660 VATSLKCIAIQSEPLAESPYAKVDPSSVNLVPESATVPSSDRVFG 526
+A+S + I+ E L SP AK +V + S++ P+S V+G
Sbjct: 712 MASSAVSVTIKPEKLVFSPTAKTQRFAVTVASSSSSPPASAPVYG 756
>11_06_0743 + 26847652-26849424
Length = 590
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 537 CPKTARWRFPVPSSPKTDPPWRTDFLPAA 623
C R R P S T PPW LPAA
Sbjct: 306 CSPRCRRRARAPPSSSTSPPWPEPALPAA 334
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 591 DPSSVNLVPESATVPSSDRVFGSKKTRGSPSRPS 490
+PSSV P A PSS + S SP+ PS
Sbjct: 1809 NPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPS 1842
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +3
Query: 498 STANLASSWTRTLCPKTARWRFPVPSSPKTDPPWRTDFLPAALIG*LYISKTLPP 662
S A LA+ TRT P R R P P +P PP R + + + TLPP
Sbjct: 14 SAARLAAP-TRTRPPPRTRVRPPPPPAPPPPPPPRLEPVVVVAPSTTTATATLPP 67
>11_06_0669 - 26084906-26087350
Length = 814
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 50 KKFIKNTPNIHHHLHTIKRPVYVPGDSTINRIVTCTGTTILSSRNMLYDYPAVRRDE 220
KK +K NI + H I + + +PG S IN+ T + + ++ + + RDE
Sbjct: 7 KKILKKIENIINDGHKILQLLNLPGHSNINKRQTVSDDSRIAVTTASPPFVVIGRDE 63
>02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038
Length = 237
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 488 QDGLDG-EPRVFLDPNTLSEDGTVALSGTKFTEDGSTLAYGLSASGSDWIAI 640
QDG PR DP +L V L+ + T DGSTLA GL +G I +
Sbjct: 136 QDGFQPCRPRPGRDPPSL-----VGLACSTTTRDGSTLAVGLPLTGKGAIRV 182
>09_04_0355 + 16922863-16924224
Length = 453
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -3
Query: 625 RAAGRKSVRQGGSVFGELGTGKRHRAVFGQSVRVQEDARFAVE 497
RAA VR GG +G + + G +VR D + ++
Sbjct: 59 RAAALSVVRNGGGFYGSIAQAREREREPGMAVRASGDLEYVLD 101
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 495 VSTANLASSWTRTLCPKTARWRFPVPSSPKTDPP 596
VS W P++ +FP PSSP PP
Sbjct: 41 VSGGGCGDGWPSPQNPRSVPVQFPSPSSPPPSPP 74
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 68 TPNIHHHLHTIKRPVYVPGDSTINRIVTCTGTTILSSRNMLYDYPAVRRDET---VVDDY 238
TP++ +HL K P Y G+ I+ G I N L +DET V D+
Sbjct: 390 TPSVSYHLMNNKNPKYRNGNLVISSESLSHGLRIFQESNDLGKDTVEAKDETEMVVPDNE 449
Query: 239 HGTKIK 256
+ KI+
Sbjct: 450 YEKKIR 455
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,188,340
Number of Sequences: 37544
Number of extensions: 426780
Number of successful extensions: 1379
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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