Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt14a23
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094675-1|AAM11028.1|  234|Drosophila melanogaster GH04831p pro...   190   1e-48
AE014297-94|AAF52124.1|  234|Drosophila melanogaster CG9804-PA p...   190   1e-48
AY118575-1|AAM49944.1|  453|Drosophila melanogaster LD43175p pro...    30   3.1  
AF237613-1|AAF60328.1|  453|Drosophila melanogaster YELLOW-B pro...    30   3.1  
AE014134-2765|AAF53564.1|  453|Drosophila melanogaster CG17914-P...    30   3.1  
BT024359-1|ABC86421.1|  213|Drosophila melanogaster IP08110p pro...    29   5.4  
AE014298-1162|AAF46359.1|  213|Drosophila melanogaster CG15343-P...    29   5.4  
AY058630-1|AAL13859.1|  487|Drosophila melanogaster LD32783p pro...    28   9.5  
AF025540-1|AAC14018.1|  487|Drosophila melanogaster zinc finger ...    28   9.5  
AE014134-2742|AAF53549.1|  487|Drosophila melanogaster CG4694-PA...    28   9.5  

>AY094675-1|AAM11028.1|  234|Drosophila melanogaster GH04831p
           protein.
          Length = 234

 Score =  190 bits (464), Expect = 1e-48
 Identities = 93/179 (51%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
 Frame = +3

Query: 117 MVKIWRLGLMSYDTALNIQLAIARKHLDSIKNGLDFNHDTLLLVEHKPVYTVGIRDK--T 290
           +V + R G  SY   L +Q  +AR +   I N      + L+L EH PVYTVG+R K  T
Sbjct: 7   LVTVVRAGRHSYSAGLQLQQRLARSN--QILNPPAEFRNYLVLQEHDPVYTVGLRTKDYT 64

Query: 291 PNNEILRLKSLGADFKKTNRGGLVTFHGPGQLVAYPIINLKYYKPSVKWYVNSLEEIGIR 470
             +E  RL+ LGADF +T+RGGL+TFHGPGQLVAYPI++L  + PS++WYV +LE + + 
Sbjct: 65  AQDED-RLRRLGADFHRTDRGGLITFHGPGQLVAYPILHLGQFVPSIRWYVATLERMVVE 123

Query: 471 LCGDLGIQASR-SPHTGVWVADNKIAAIGVHTSRYVTTHGIAINCDIDLSWFKHIDPCG 644
            C  +GI +++ +  TG+WV DNKI AIG+H SRYVTTHGI +NC  DL WF+HI PCG
Sbjct: 124 ACHQMGISSAKATKDTGIWVGDNKICAIGIHGSRYVTTHGIGLNCCTDLQWFEHIVPCG 182


>AE014297-94|AAF52124.1|  234|Drosophila melanogaster CG9804-PA
           protein.
          Length = 234

 Score =  190 bits (464), Expect = 1e-48
 Identities = 93/179 (51%), Positives = 123/179 (68%), Gaps = 3/179 (1%)
 Frame = +3

Query: 117 MVKIWRLGLMSYDTALNIQLAIARKHLDSIKNGLDFNHDTLLLVEHKPVYTVGIRDK--T 290
           +V + R G  SY   L +Q  +AR +   I N      + L+L EH PVYTVG+R K  T
Sbjct: 7   LVTVVRAGRHSYSAGLQLQQRLARSN--QILNPPAEFRNYLVLQEHDPVYTVGLRTKDYT 64

Query: 291 PNNEILRLKSLGADFKKTNRGGLVTFHGPGQLVAYPIINLKYYKPSVKWYVNSLEEIGIR 470
             +E  RL+ LGADF +T+RGGL+TFHGPGQLVAYPI++L  + PS++WYV +LE + + 
Sbjct: 65  AQDED-RLRRLGADFHRTDRGGLITFHGPGQLVAYPILHLGQFVPSIRWYVATLERMVVE 123

Query: 471 LCGDLGIQASR-SPHTGVWVADNKIAAIGVHTSRYVTTHGIAINCDIDLSWFKHIDPCG 644
            C  +GI +++ +  TG+WV DNKI AIG+H SRYVTTHGI +NC  DL WF+HI PCG
Sbjct: 124 ACHQMGISSAKATKDTGIWVGDNKICAIGIHGSRYVTTHGIGLNCCTDLQWFEHIVPCG 182


>AY118575-1|AAM49944.1|  453|Drosophila melanogaster LD43175p
           protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = +3

Query: 420 KPSVKWYVNSLEEIGIRLCGDLGIQASRSPHTGVWVADNKIAAIGVHTSRYVTTHGIAIN 599
           KP   W  ++L+E    L     ++A R     +WV D++I+ +   T  Y     +  +
Sbjct: 98  KPFPSWQAHNLQEAEPELVSPFRVRADRCGR--LWVLDSRISGVLEQTKIYGAAQLLVYD 155

Query: 600 CDIDLSWFKHIDPCG 644
              D    +H+ P G
Sbjct: 156 LHNDDLLRRHVLPAG 170


>AF237613-1|AAF60328.1|  453|Drosophila melanogaster YELLOW-B
           protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = +3

Query: 420 KPSVKWYVNSLEEIGIRLCGDLGIQASRSPHTGVWVADNKIAAIGVHTSRYVTTHGIAIN 599
           KP   W  ++L+E    L     ++A R     +WV D++I+ +   T  Y     +  +
Sbjct: 98  KPFPSWQAHNLQEAEPELVSPFRVRADRCGR--LWVLDSRISGVLEQTKIYGAAQLLVYD 155

Query: 600 CDIDLSWFKHIDPCG 644
              D    +H+ P G
Sbjct: 156 LHNDDLLRRHVLPAG 170


>AE014134-2765|AAF53564.1|  453|Drosophila melanogaster CG17914-PA
           protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 18/75 (24%), Positives = 32/75 (42%)
 Frame = +3

Query: 420 KPSVKWYVNSLEEIGIRLCGDLGIQASRSPHTGVWVADNKIAAIGVHTSRYVTTHGIAIN 599
           KP   W  ++L+E    L     ++A R     +WV D++I+ +   T  Y     +  +
Sbjct: 98  KPFPSWQAHNLQEAEPELVSPFRVRADRCGR--LWVLDSRISGVLEQTKIYGAAQLLVYD 155

Query: 600 CDIDLSWFKHIDPCG 644
              D    +H+ P G
Sbjct: 156 LHNDDLLRRHVLPAG 170


>BT024359-1|ABC86421.1|  213|Drosophila melanogaster IP08110p
           protein.
          Length = 213

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = +3

Query: 384 LVAYPIINLKYYKPSVKWYVNSLEEIGIRLCGDLGIQASRSPHTGVWVADNKIAAIGVH 560
           L A P   + +Y P VK    +     +RL G   ++  +S    +W  +N  A I  H
Sbjct: 79  LQANPKACITFYMPDVKDKAGNQNAWQVRLIGATAVELDQSEMDALWAKENLAAQIRGH 137


>AE014298-1162|AAF46359.1|  213|Drosophila melanogaster CG15343-PA
           protein.
          Length = 213

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = +3

Query: 384 LVAYPIINLKYYKPSVKWYVNSLEEIGIRLCGDLGIQASRSPHTGVWVADNKIAAIGVH 560
           L A P   + +Y P VK    +     +RL G   ++  +S    +W  +N  A I  H
Sbjct: 79  LQANPKACITFYMPDVKDKAGNQNAWQVRLIGATAVELDQSEMDALWAKENLAAQIRGH 137


>AY058630-1|AAL13859.1|  487|Drosophila melanogaster LD32783p
           protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 582 HGIAINCDIDLSWFKHIDP 638
           H IA+N D  L WF+ IDP
Sbjct: 287 HVIAVNVDGQLRWFQSIDP 305


>AF025540-1|AAC14018.1|  487|Drosophila melanogaster zinc finger
           protein HER protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 582 HGIAINCDIDLSWFKHIDP 638
           H IA+N D  L WF+ IDP
Sbjct: 287 HVIAVNVDGQLRWFQSIDP 305


>AE014134-2742|AAF53549.1|  487|Drosophila melanogaster CG4694-PA
           protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 582 HGIAINCDIDLSWFKHIDP 638
           H IA+N D  L WF+ IDP
Sbjct: 287 HVIAVNVDGQLRWFQSIDP 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,673,987
Number of Sequences: 53049
Number of extensions: 630658
Number of successful extensions: 1249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)