Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13p24
         (124 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070513-1|AAL47984.1|  551|Drosophila melanogaster GH19382p pro...    26   8.4  
AE013599-2304|AAO41370.1|  577|Drosophila melanogaster CG4945-PC...    26   8.4  
AE013599-2303|AAO41369.1|  577|Drosophila melanogaster CG4945-PB...    26   8.4  
AE013599-2302|AAF57985.2|  551|Drosophila melanogaster CG4945-PA...    26   8.4  

>AY070513-1|AAL47984.1|  551|Drosophila melanogaster GH19382p
           protein.
          Length = 551

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 90  RSDSPRYKLIDGGLHRPATTTGSPRNDGLP 1
           RSD  R KL D G   P  +T   RN+ LP
Sbjct: 156 RSDFQRIKLCDFGESFPTGSTVERRNEWLP 185


>AE013599-2304|AAO41370.1|  577|Drosophila melanogaster CG4945-PC,
           isoform C protein.
          Length = 577

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 90  RSDSPRYKLIDGGLHRPATTTGSPRNDGLP 1
           RSD  R KL D G   P  +T   RN+ LP
Sbjct: 156 RSDFQRIKLCDFGESFPTGSTVERRNEWLP 185


>AE013599-2303|AAO41369.1|  577|Drosophila melanogaster CG4945-PB,
           isoform B protein.
          Length = 577

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 90  RSDSPRYKLIDGGLHRPATTTGSPRNDGLP 1
           RSD  R KL D G   P  +T   RN+ LP
Sbjct: 156 RSDFQRIKLCDFGESFPTGSTVERRNEWLP 185


>AE013599-2302|AAF57985.2|  551|Drosophila melanogaster CG4945-PA,
           isoform A protein.
          Length = 551

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 90  RSDSPRYKLIDGGLHRPATTTGSPRNDGLP 1
           RSD  R KL D G   P  +T   RN+ LP
Sbjct: 156 RSDFQRIKLCDFGESFPTGSTVERRNEWLP 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,317,490
Number of Sequences: 53049
Number of extensions: 50080
Number of successful extensions: 185
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 24,988,368
effective HSP length: 21
effective length of database: 23,874,339
effective search space used: 453612441
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)