Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13p03
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein. 175 1e-43
BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating mol... 175 1e-43
AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating mol... 175 1e-43
BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for IM... 42 0.002
AF471294-1|AAQ05469.1| 118|Homo sapiens Ig heavy chain variable... 33 1.3
AF471366-1|AAQ05541.1| 122|Homo sapiens Ig heavy chain variable... 30 7.0
BC021711-1|AAH21711.1| 367|Homo sapiens apolipoprotein B mRNA e... 30 9.2
AL137800-10|CAI19483.1| 367|Homo sapiens apolipoprotein B mRNA ... 30 9.2
AK098557-1|BAC05332.1| 367|Homo sapiens protein ( Homo sapiens ... 30 9.2
>D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein.
Length = 407
Score = 175 bits (426), Expect = 1e-43
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = +3
Query: 165 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 344
NK++VEFRAG+M+LKG V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79
Query: 345 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 503
CEF RV +C +GRVYV WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80 CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132
>BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 175 bits (426), Expect = 1e-43
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = +3
Query: 165 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 344
NK++VEFRAG+M+LKG V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79
Query: 345 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 503
CEF RV +C +GRVYV WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80 CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132
>AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 175 bits (426), Expect = 1e-43
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = +3
Query: 165 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 344
NK++VEFRAG+M+LKG V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20 NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79
Query: 345 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 503
CEF RV +C +GRVYV WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80 CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132
>BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for
IMAGE:3897044) protein.
Length = 296
Score = 42.3 bits (95), Expect = 0.002
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 441 PKADKDEEYCRRINEALNNPP 503
PK D+DEE+CR++NE LNNPP
Sbjct: 1 PKTDQDEEHCRKVNEYLNNPP 21
>AF471294-1|AAQ05469.1| 118|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 118
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Frame = +3
Query: 201 TLKGRM-VHPDKRKGLLYVY----QGEDSLMHFCWKDRTTGEV 314
++KGR + D K LY+ +GED+ +++C KDR TG++
Sbjct: 63 SMKGRFTISRDNSKNTLYLQMNSLRGEDTAVYYCAKDRATGDL 105
>AF471366-1|AAQ05541.1| 122|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 122
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = +3
Query: 201 TLKGRM-VHPDKRKGLLYVYQG----EDSLMHFCWKDRTTGE 311
++KGR + D KG LY+Y +D+ +++C KDR G+
Sbjct: 63 SVKGRFTISRDNSKGTLYLYLNSLVDDDTAVYYCAKDRLAGD 104
>BC021711-1|AAH21711.1| 367|Homo sapiens apolipoprotein B mRNA
editing enzyme, catalytic polypeptide-like 4 (putative)
protein.
Length = 367
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 231 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 106
C + PY + T + L C + FP T+ QT TFY
Sbjct: 28 CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69
>AL137800-10|CAI19483.1| 367|Homo sapiens apolipoprotein B mRNA
editing enzyme, catalytic polypeptide-like 4 (putative)
protein.
Length = 367
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 231 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 106
C + PY + T + L C + FP T+ QT TFY
Sbjct: 28 CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69
>AK098557-1|BAC05332.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ25691 fis, clone TST04456. ).
Length = 367
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 231 CLDVPYDLSTSYDQHEILLCVCFLLNFPQDQTYCQTVQ*TFY 106
C + PY + T + L C + FP T+ QT TFY
Sbjct: 28 CSNCPYHIRTGEEARVSLTEFCQIFGFPYGTTFPQTKHLTFY 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,242,225
Number of Sequences: 237096
Number of extensions: 1973113
Number of successful extensions: 7717
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7716
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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