Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13o12
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19437-1|AAB53943.1| 337|Homo sapiens transaldolase protein. 326 4e-89
BC010103-1|AAH10103.1| 337|Homo sapiens transaldolase 1 protein. 326 4e-89
AF058913-1|AAF40478.1| 337|Homo sapiens transaldolase protein. 326 4e-89
AF010400-1|AAC52068.1| 337|Homo sapiens transaldolase-related p... 326 4e-89
BC018847-1|AAH18847.2| 336|Homo sapiens TALDO1 protein protein. 324 2e-88
L27346-1|AAL31313.1| 78|Homo sapiens transaldolase protein. 101 3e-21
>L19437-1|AAB53943.1| 337|Homo sapiens transaldolase protein.
Length = 337
Score = 326 bits (801), Expect = 4e-89
Identities = 159/230 (69%), Positives = 185/230 (80%), Gaps = 1/230 (0%)
Frame = +2
Query: 5 MSGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQH 184
MS P ++ SALDQLKQ +TVVADTGDF A+ EYKP DATTNPSLIL+AA M YQ
Sbjct: 1 MSSSPVKRQRMESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQE 60
Query: 185 ILDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIA 364
++++AI YG+ G S E+Q+ +D L VLFG EILK IPGRVS EVDARLSFDKDA +A
Sbjct: 61 LVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVA 120
Query: 365 KAIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAE 544
+A + I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAE
Sbjct: 121 RARRLIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAE 180
Query: 545 ANVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYK 691
A VTLISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YK
Sbjct: 181 AGVTLISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYK 230
>BC010103-1|AAH10103.1| 337|Homo sapiens transaldolase 1 protein.
Length = 337
Score = 326 bits (801), Expect = 4e-89
Identities = 159/230 (69%), Positives = 185/230 (80%), Gaps = 1/230 (0%)
Frame = +2
Query: 5 MSGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQH 184
MS P ++ SALDQLKQ +TVVADTGDF A+ EYKP DATTNPSLIL+AA M YQ
Sbjct: 1 MSSSPVKRQRMESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQE 60
Query: 185 ILDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIA 364
++++AI YG+ G S E+Q+ +D L VLFG EILK IPGRVS EVDARLSFDKDA +A
Sbjct: 61 LVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVA 120
Query: 365 KAIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAE 544
+A + I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAE
Sbjct: 121 RARRLIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAE 180
Query: 545 ANVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYK 691
A VTLISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YK
Sbjct: 181 AGVTLISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYK 230
>AF058913-1|AAF40478.1| 337|Homo sapiens transaldolase protein.
Length = 337
Score = 326 bits (801), Expect = 4e-89
Identities = 159/230 (69%), Positives = 185/230 (80%), Gaps = 1/230 (0%)
Frame = +2
Query: 5 MSGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQH 184
MS P ++ SALDQLKQ +TVVADTGDF A+ EYKP DATTNPSLIL+AA M YQ
Sbjct: 1 MSSSPVKRQRMESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQE 60
Query: 185 ILDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIA 364
++++AI YG+ G S E+Q+ +D L VLFG EILK IPGRVS EVDARLSFDKDA +A
Sbjct: 61 LVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVA 120
Query: 365 KAIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAE 544
+A + I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAE
Sbjct: 121 RARRLIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAE 180
Query: 545 ANVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYK 691
A VTLISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YK
Sbjct: 181 AGVTLISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYK 230
>AF010400-1|AAC52068.1| 337|Homo sapiens transaldolase-related
protein protein.
Length = 337
Score = 326 bits (801), Expect = 4e-89
Identities = 159/230 (69%), Positives = 185/230 (80%), Gaps = 1/230 (0%)
Frame = +2
Query: 5 MSGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQH 184
MS P ++ SALDQLKQ +TVVADTGDF A+ EYKP DATTNPSLIL+AA M YQ
Sbjct: 1 MSSSPVKRQRMESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQE 60
Query: 185 ILDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIA 364
++++AI YG+ G S E+Q+ +D L VLFG EILK IPGRVS EVDARLSFDKDA +A
Sbjct: 61 LVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVA 120
Query: 365 KAIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAE 544
+A + I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAE
Sbjct: 121 RARRLIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAE 180
Query: 545 ANVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYK 691
A VTLISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YK
Sbjct: 181 AGVTLISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYK 230
>BC018847-1|AAH18847.2| 336|Homo sapiens TALDO1 protein protein.
Length = 336
Score = 324 bits (796), Expect = 2e-88
Identities = 158/229 (68%), Positives = 184/229 (80%), Gaps = 1/229 (0%)
Frame = +2
Query: 8 SGEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHI 187
S P ++ SALDQLKQ +TVVADTGDF A+ EYKP DATTNPSLIL+AA M YQ +
Sbjct: 1 SSSPVKRQRMESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMPAYQEL 60
Query: 188 LDKAIKYGKDNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAK 367
+++AI YG+ G S E+Q+ +D L VLFG EILK IPGRVS EVDARLSFDKDA +A+
Sbjct: 61 VEEAIAYGRKLGGSQEDQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVAR 120
Query: 368 AIKFINLFAEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEA 547
A + I L+ E GI K+RILIKL+STWEGIQA KELE++HGIHCN+TLLFS QA+ACAEA
Sbjct: 121 ARRLIELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEA 180
Query: 548 NVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKKFGYK 691
VTLISPFVGRILDW+V +T KK+YE EDPGV SVTKIYNYYKKF YK
Sbjct: 181 GVTLISPFVGRILDWHVANTDKKSYEPLEDPGVKSVTKIYNYYKKFSYK 229
>L27346-1|AAL31313.1| 78|Homo sapiens transaldolase protein.
Length = 78
Score = 101 bits (241), Expect = 3e-21
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +2
Query: 101 AMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGSSIEEQVAETLDMLSVLFG 280
A+ EYKP DATTNPSLIL+AA M YQ ++++AI YG+ G S E+Q+ +D L VLFG
Sbjct: 1 AIDEYKPQDATTNPSLILAAAQMPAYQELVEEAIAYGRKLGGSQEDQIKNAIDKLFVLFG 60
Query: 281 CEILKIIPGRVSVEVDAR 334
EILK IPGRVS EVDAR
Sbjct: 61 AEILKKIPGRVSTEVDAR 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,563,254
Number of Sequences: 237096
Number of extensions: 2385180
Number of successful extensions: 12277
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12272
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -