Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13m20
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.7  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   4.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.0  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   5.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.2  

>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 285 KYDKIFLDNKNLVKFIEKCFALENSDGMARIVN 383
           KYD + L    +V F   C A  +S G  +IVN
Sbjct: 406 KYDCVTLLFSGIVGFGAYCAAHTDSSGAVKIVN 438


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 285 KYDKIFLDNKNLVKFIEKCFALENSDGMARIVN 383
           KYD + L    +V F   C A  +S G  +IVN
Sbjct: 406 KYDCVTLLFSGIVGFGAYCAAHTDSSGAMKIVN 438


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 581 SCGHCYKLGLLLNFMKFQCITHT 513
           SC +C K+ + L  +K    THT
Sbjct: 18  SCKYCEKVYVSLGALKMHIRTHT 40


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 261 STRQTCDIKYDKIFLDNKNLVKFIEKCFALENSDG 365
           S +QT D       +  K  V  +E  +A+EN+ G
Sbjct: 95  SRKQTIDPLSSNTQITRKRRVGIVENQYAVENNTG 129


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
 Frame = -1

Query: 394 NNVRLTILAIP-SEFSRAKHFSINFTKFLLSKNIL---SYFMSQ---VCLVLGCPTSSSK 236
           NN    I+ +  SE +    F + FT  LLS NIL    Y M+    V L +   T +  
Sbjct: 204 NNTEWEIVHMSHSESTIDSKFGLGFTTDLLSYNILLRRHYSMNSTTYVTLTIVLMTMTLM 263

Query: 235 TIMLNESS 212
           T+ L  SS
Sbjct: 264 TLWLEPSS 271


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 418 GHVFWYKPNNVRLTILAIPSEFSRAKHFSINFTKF 314
           G  F ++     ++ILAI   +      S+NF  F
Sbjct: 167 GVYFAFRDQGACISILAIKVYYISCPEISVNFAHF 201


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 436 CELLYSGHVFWYKPNNVRLTILAIPS 359
           C++   G V W  P   RL  + I S
Sbjct: 345 CQMDSGGPVLWQNPRTKRLVNIGIIS 370


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 145 KSPIISTFYQTILCYV 98
           K+P+IS +Y   +C V
Sbjct: 271 KTPLISLYYGVSICLV 286


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 355 IQMGWRELLIAHY 393
           ++ GW ELLIA +
Sbjct: 267 LRAGWNELLIASF 279


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 355 IQMGWRELLIAHY 393
           ++ GW ELLIA +
Sbjct: 267 LRAGWNELLIASF 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,607
Number of Sequences: 438
Number of extensions: 3352
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)