Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13m12
(551 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 23 1.6
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 22 3.6
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 22 4.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.8
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 6.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 8.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.3
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 8.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 8.3
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 23.4 bits (48), Expect = 1.6
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = -1
Query: 230 VREHWQVYEHRAQDLVDLAAFAEEKVI--GLHDEREGV----RGVECGSIDSGQSECVRG 69
+R++ ++ H AQD V + E + G+ + V R +E GS DS +
Sbjct: 19 MRQNMKLKRHLAQDKVKVRVAEEVDPLPFGVENTISSVPQPPRSLE-GSYDSSSGDSPVS 77
Query: 68 RRASVPRHTGAGGA 27
+S HTG GG+
Sbjct: 78 SHSSNGIHTGFGGS 91
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 22.2 bits (45), Expect = 3.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 182 DLAAFAEEKVIGLHD 138
D+A EK+IGLH+
Sbjct: 12 DMAVLFPEKIIGLHN 26
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 41 PCAAARWPSSRARTRSDRCQYCHIR 115
PC + S R +RCQYC ++
Sbjct: 54 PCTKNQ-QCSILRINRNRCQYCRLK 77
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 41 PCAAARWPSSRARTRSDRCQYCHIR 115
PC + S R +RCQYC ++
Sbjct: 103 PCTKNQ-QCSILRINRNRCQYCRLK 126
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.4 bits (43), Expect = 6.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 313 PSVRGGSRGEFGDCSSRVMGDIQPMLAPYAN 221
P ++ G G + V D P++APY N
Sbjct: 78 PRIQDGVPLTLGYVTREVSIDGNPLIAPYPN 108
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 5 VGPQSALSRHLPPCAAARWPSSRARTRS 88
+GP + R +PP A PS R S
Sbjct: 147 IGPSTPFPRFIPPNAYRFRPSLNPRFES 174
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 5 VGPQSALSRHLPPCAAARWPSSRARTRS 88
+GP + R +PP A PS R S
Sbjct: 147 IGPSTPFPRFIPPNAYRFRPSLNPRFES 174
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 5 VGPQSALSRHLPPCAAARWPSSRARTRS 88
+GP + R +PP A PS R S
Sbjct: 147 IGPSTPFPRFIPPNAYRFRPSLNPRFES 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 422 DEQKRRLPADPVSEEGHEVVCRHTREVRGR 333
DEQ + + +G +V RH E+RG+
Sbjct: 159 DEQTCVMKFGSWTYDGFQVDLRHIDEIRGK 188
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 8.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 5 VGPQSALSRHLPPCAAARWPSSRARTRS 88
+GP + R +PP A PS R S
Sbjct: 380 IGPSTPFPRFIPPNAYRFRPSLNPRFES 407
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.0 bits (42), Expect = 8.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 141 MKSYYFFFREGSKIN 185
MK YY+FF + + N
Sbjct: 472 MKVYYYFFTQRTSTN 486
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 8.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 141 MKSYYFFFREGSKIN 185
MK YY+FF + + N
Sbjct: 472 MKVYYYFFTQRTSTN 486
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,698
Number of Sequences: 438
Number of extensions: 3034
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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