Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13m02
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-973|AAF54405.1|  258|Drosophila melanogaster CG16790-PA...   128   8e-30
BT023530-1|AAY84930.1|  258|Drosophila melanogaster IP09928p pro...   125   4e-29
BT023543-1|AAY84943.1|  191|Drosophila melanogaster IP09828p pro...   116   4e-26
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    29   5.4  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    29   5.4  

>AE014297-973|AAF54405.1|  258|Drosophila melanogaster CG16790-PA
           protein.
          Length = 258

 Score =  128 bits (308), Expect = 8e-30
 Identities = 67/178 (37%), Positives = 103/178 (57%), Gaps = 2/178 (1%)
 Frame = +2

Query: 113 ETHIDDHQKHKGRKRSFPHVRGNWATFVYVQYPNDDFVNKLSRKVLDALT--ESSHTWHK 286
           E  +DD  +H GR RSF H RGNWAT+VYV  P    V++L     +A+   E       
Sbjct: 55  EDVVDDPAEHGGRMRSFKHERGNWATYVYV--PATACVDQLEEFQTEAIARLEPHLELQP 112

Query: 287 CENLHITLSKTVVLNYHWIAPFHNSLKKTLTNIKCFELEFDELQVLCNEDKSRTFVVLKT 466
            E+LH++LS+TVVL YH I  F  SL+  L +   F      L++  NE+++RTF+    
Sbjct: 113 NESLHLSLSRTVVLQYHQIDEFSRSLQSALNSSAGFAATLQGLRIYTNEERTRTFIAAPL 172

Query: 467 NRFSHKHFFAITKKVDEILSEFKLPKFYDEPSFHMSILWTNGDKETETNGALDKLNQI 640
           +    +   AI + +D+++ +++L +FYD  SFH+S+LW  GD+ET  N  L +L ++
Sbjct: 173 DAAFVEKMTAILQPIDQVMLDYRLQQFYDPASFHVSLLWCVGDQETLLNEKLTELKEL 230


>BT023530-1|AAY84930.1|  258|Drosophila melanogaster IP09928p
           protein.
          Length = 258

 Score =  125 bits (302), Expect = 4e-29
 Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
 Frame = +2

Query: 113 ETHIDDHQKHKGRKRSFPHVRGNWATFVYVQYPNDDFVNKLSRKVLDALT--ESSHTWHK 286
           E  +DD  +H  R RSF H RGNWAT+VYV  P    V++L     +A+   E       
Sbjct: 55  EDVVDDPAEHGSRMRSFKHERGNWATYVYV--PATACVDQLEEFQTEAIARLEPHLELQP 112

Query: 287 CENLHITLSKTVVLNYHWIAPFHNSLKKTLTNIKCFELEFDELQVLCNEDKSRTFVVLKT 466
            E+LH++LS+TVVL YH I  F  SL+  L +   F      L++  NE+++RTF+    
Sbjct: 113 NESLHLSLSRTVVLQYHQIDEFSRSLQSALNSSAGFAATLQGLRIYTNEERTRTFIAAPL 172

Query: 467 NRFSHKHFFAITKKVDEILSEFKLPKFYDEPSFHMSILWTNGDKETETNGALDKLNQI 640
           +    +   AI + +D+++ +++L +FYD  SFH+S+LW  GD+ET  N  L +L ++
Sbjct: 173 DAAFVEKMTAILQPIDQVMLDYRLQQFYDPASFHVSLLWCVGDQETLLNEKLTELKEL 230


>BT023543-1|AAY84943.1|  191|Drosophila melanogaster IP09828p
           protein.
          Length = 191

 Score =  116 bits (278), Expect = 4e-26
 Identities = 61/164 (37%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
 Frame = +2

Query: 155 RSFPHVRGNWATFVYVQYPNDDFVNKLSRKVLDALT--ESSHTWHKCENLHITLSKTVVL 328
           RSF H RGNWAT+VYV  P    V++L     +A+   E        E+LH++LS+TVVL
Sbjct: 2   RSFKHERGNWATYVYV--PATACVDQLEEFQTEAIARLEPHLELQPNESLHLSLSRTVVL 59

Query: 329 NYHWIAPFHNSLKKTLTNIKCFELEFDELQVLCNEDKSRTFVVLKTNRFSHKHFFAITKK 508
            YH I  F  SL+  L +   F      L++  NE+++RTF+    +    +   AI + 
Sbjct: 60  QYHQIDEFSRSLQSALNSSAGFAATLQGLRIYTNEERTRTFIAAPLDAAFVEKMTAILQP 119

Query: 509 VDEILSEFKLPKFYDEPSFHMSILWTNGDKETETNGALDKLNQI 640
           +D+++ +++L +FYD  SFH+S+LW  GD+ET  N  L +L ++
Sbjct: 120 IDQVMLDYRLQQFYDPASFHVSLLWCVGDQETLLNEKLTELKEL 163


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 236  SRKVLDALTESSHTWHKCENLHITLSKTV---VLNYHWIAPFHNSLKK 370
            SR+V DAL E+  TW   E L +T+  T    VL Y W+A     L K
Sbjct: 5252 SRQVYDALLEAKQTWEDKE-LEVTIIPTYDTDVLGY-WVAENEELLAK 5297


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 236  SRKVLDALTESSHTWHKCENLHITLSKTV---VLNYHWIAPFHNSLKK 370
            SR+V DAL E+  TW   E L +T+  T    VL Y W+A     L K
Sbjct: 5337 SRQVYDALLEAKQTWEDKE-LEVTIIPTYDTDVLGY-WVAENEELLAK 5382


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,138,176
Number of Sequences: 53049
Number of extensions: 455296
Number of successful extensions: 1127
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)