Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13l17
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M69175-1|AAA36011.1| 173|Homo sapiens H-protein protein. 154 2e-37
D00723-1|BAA00625.1| 173|Homo sapiens protein ( Homo sapiens mR... 154 2e-37
BT009827-1|AAP88829.1| 173|Homo sapiens glycine cleavage system... 154 2e-37
BC020922-1|AAH20922.1| 173|Homo sapiens glycine cleavage system... 154 2e-37
BC000790-1|AAH00790.1| 173|Homo sapiens glycine cleavage system... 154 2e-37
AY533031-1|AAS59848.1| 125|Homo sapiens mitochondrial glycine c... 154 2e-37
AY310735-1|AAP50260.1| 173|Homo sapiens glycine cleavage system... 154 2e-37
CR457072-1|CAG33353.1| 173|Homo sapiens GCSH protein. 151 2e-36
U03464-1|AAB52902.1| 1465|Homo sapiens ATP7B protein. 31 4.8
DQ015922-1|AAY41166.1| 1354|Homo sapiens Wilson's disease protei... 31 4.8
AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens ... 31 4.8
AB209461-1|BAD92698.1| 662|Homo sapiens ATPase, Cu++ transporti... 31 4.8
U11700-1|AAA92667.1| 1465|Homo sapiens copper transporting ATPas... 30 6.4
L25591-2|AAA79212.1| 762|Homo sapiens protein ( Homo sapiens (P... 30 6.4
BC117200-1|AAI17201.1| 1035|Homo sapiens ATP7B protein protein. 30 6.4
AL162377-2|CAI13428.1| 1465|Homo sapiens ATP7B protein. 30 6.4
AL139082-1|CAI12888.1| 1465|Homo sapiens ATP7B protein. 30 6.4
AL138821-2|CAI13743.1| 1465|Homo sapiens ATP7B protein. 30 6.4
AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2 pro... 30 8.4
>M69175-1|AAA36011.1| 173|Homo sapiens H-protein protein.
Length = 173
Score = 154 bits (374), Expect = 2e-37
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ GT L DE GALESVKA
Sbjct: 49 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 166
>D00723-1|BAA00625.1| 173|Homo sapiens protein ( Homo sapiens mRNA
for hydrogen carrier protein, a component of an enzyme
complex, glycine synthase (EC 2.1.2.10). ).
Length = 173
Score = 154 bits (374), Expect = 2e-37
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ GT L DE GALESVKA
Sbjct: 49 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 166
>BT009827-1|AAP88829.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 154 bits (374), Expect = 2e-37
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ GT L DE GALESVKA
Sbjct: 49 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 166
>BC020922-1|AAH20922.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 154 bits (374), Expect = 2e-37
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ GT L DE GALESVKA
Sbjct: 49 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 166
>BC000790-1|AAH00790.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 154 bits (374), Expect = 2e-37
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ GT L DE GALESVKA
Sbjct: 49 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 166
>AY533031-1|AAS59848.1| 125|Homo sapiens mitochondrial glycine
cleavage system H-protein precursor protein.
Length = 125
Score = 154 bits (374), Expect = 2e-37
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ GT L DE GALESVKA
Sbjct: 1 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 60
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 61 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 118
>AY310735-1|AAP50260.1| 173|Homo sapiens glycine cleavage system
protein H (aminomethyl carrier) protein.
Length = 173
Score = 154 bits (374), Expect = 2e-37
Identities = 68/118 (57%), Positives = 91/118 (77%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ GT L DE GALESVKA
Sbjct: 49 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKA 108
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 166
>CR457072-1|CAG33353.1| 173|Homo sapiens GCSH protein.
Length = 173
Score = 151 bits (366), Expect = 2e-36
Identities = 67/118 (56%), Positives = 90/118 (76%)
Frame = +3
Query: 306 SSRKYTDRHEWVTIDKDIGTVGVSEYAQESLGDVVFAQLPDPGTDLKAGDECGALESVKA 485
S RK+T++HEWVT + IGTVG+S +AQE+LGDVV+ LP+ T L DE GALESVKA
Sbjct: 49 SVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVWTKLNKQDEFGALESVKA 108
Query: 486 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKK 659
ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ + SE+++LM+EE Y+K
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEK 166
>U03464-1|AAB52902.1| 1465|Homo sapiens ATP7B protein.
Length = 1465
Score = 30.7 bits (66), Expect = 4.8
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 1073 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 1128
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 1129 EAGSLPAEKDAAPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 1175
>DQ015922-1|AAY41166.1| 1354|Homo sapiens Wilson's disease protein
protein.
Length = 1354
Score = 30.7 bits (66), Expect = 4.8
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 962 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 1017
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 1018 EAGSLPAEKDAAPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 1064
>AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ42813 fis, clone BRCAN2012355. ).
Length = 180
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = -1
Query: 333 HVYQYISLMIHLCCTSGITYSMFV*CLTVNDALICKFSLFVISISVLPFYCQYFL*ITNR 154
++Y YI IH+C + S++V T I ++L+V + + + C Y +
Sbjct: 98 YIYVYIYTHIHICVHINMYVSIYVYIYTCIQIYIYMYTLYVCTYT---YMCTYIHICIHT 154
Query: 153 ILWYLNVIWNFRCASNI 103
+ Y+ V + +C NI
Sbjct: 155 SIIYVCVYIHIQCPLNI 171
>AB209461-1|BAD92698.1| 662|Homo sapiens ATPase, Cu++ transporting,
beta polypeptide isoform a variant protein.
Length = 662
Score = 30.7 bits (66), Expect = 4.8
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 270 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 325
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 326 EAGSLPAEKDAAPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 372
>U11700-1|AAA92667.1| 1465|Homo sapiens copper transporting ATPase
protein.
Length = 1465
Score = 30.3 bits (65), Expect = 6.4
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 1073 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 1128
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 1129 EAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 1175
>L25591-2|AAA79212.1| 762|Homo sapiens protein ( Homo sapiens (PWD)
gene mRNA, 3' end. ).
Length = 762
Score = 30.3 bits (65), Expect = 6.4
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 370 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 425
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 426 EAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 472
>BC117200-1|AAI17201.1| 1035|Homo sapiens ATP7B protein protein.
Length = 1035
Score = 30.3 bits (65), Expect = 6.4
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 643 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 698
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 699 EAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 745
>AL162377-2|CAI13428.1| 1465|Homo sapiens ATP7B protein.
Length = 1465
Score = 30.3 bits (65), Expect = 6.4
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 1073 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 1128
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 1129 EAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 1175
>AL139082-1|CAI12888.1| 1465|Homo sapiens ATP7B protein.
Length = 1465
Score = 30.3 bits (65), Expect = 6.4
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 1073 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 1128
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 1129 EAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 1175
>AL138821-2|CAI13743.1| 1465|Homo sapiens ATP7B protein.
Length = 1465
Score = 30.3 bits (65), Expect = 6.4
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +3
Query: 366 VGVSEYAQESLGDVVFAQLPD----PGTDLKAGDECGALESVKAASEIYSPLSGTVTEKN 533
V V++Y +E LG D PG + G + +E + A SE PLS + N
Sbjct: 1073 VAVTKYCKEELGTETLGYCTDFQAVPGCGI--GCKVSNVEGILAHSE--RPLSAPASHLN 1128
Query: 534 K------DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYK 656
+ + + P + ++ WL R + S+++D MT+ E K
Sbjct: 1129 EAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMK 1175
>AF231022-1|AAF61928.1| 4349|Homo sapiens protocadherin Fat 2 protein.
Length = 4349
Score = 29.9 bits (64), Expect = 8.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 438 DLKAGDECGALESVKAASE-IYSPLSGTVTEKNKD 539
DL G E G +++V A IYS + GT E NKD
Sbjct: 2703 DLPEGSEIGIVKAVAAQDPVIYSLVRGTTPESNKD 2737
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,790,470
Number of Sequences: 237096
Number of extensions: 2108946
Number of successful extensions: 7756
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7755
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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