Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13i08
(127 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 20 3.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 5.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 5.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 19 5.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 7.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 18 9.6
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 18 9.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 18 9.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 18 9.6
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 18 9.6
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 18 9.6
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 18 9.6
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 19.8 bits (39), Expect = 3.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 40 SCLPFKHRYDT 72
+CLPF+H D+
Sbjct: 276 ACLPFQHFLDS 286
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 81 WWCGIISML 55
W CG+ SML
Sbjct: 533 WLCGLSSML 541
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 81 WWCGIISML 55
W CG+ SML
Sbjct: 586 WLCGLSSML 594
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +2
Query: 20 KQLLSLSHVCLSSIDMIPHH 79
++ L VCL S+ +P H
Sbjct: 36 EKTLCSGQVCLGSVMQLPIH 55
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 18.6 bits (36), Expect = 7.3
Identities = 8/26 (30%), Positives = 11/26 (42%)
Frame = +2
Query: 5 YHLCTKQLLSLSHVCLSSIDMIPHHH 82
+H + L S+ I PHHH
Sbjct: 441 HHQHSTPLAHSSYPAAIQIGHTPHHH 466
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +2
Query: 53 SSIDMIPHHH 82
S I PHHH
Sbjct: 424 SHIHATPHHH 433
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 58 HRYDTTPPQVHNKLSILFY 114
H YD + NKL++ Y
Sbjct: 491 HEYDQNVWVLSNKLAMYLY 509
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 88 HNKLSILFYFKK 123
H + +LFYF+K
Sbjct: 7 HYRHILLFYFRK 18
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 76 PPQVHNKLSILFYFKKK 126
PP H KL F F ++
Sbjct: 119 PPTKHQKLDQKFIFPQE 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 18.2 bits (35), Expect = 9.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 11 LCTKQLLSLSHVCLSSIDMIP 73
LC+ LLSL+ L ++IP
Sbjct: 283 LCSSILLSLTVFFLLLAEIIP 303
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 100 IIYCALV 80
+IYCALV
Sbjct: 11 VIYCALV 17
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 100 IIYCALV 80
+IYCALV
Sbjct: 11 VIYCALV 17
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -2
Query: 90 VHLWWCGII 64
V +W CG+I
Sbjct: 93 VDIWACGVI 101
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,463
Number of Sequences: 438
Number of extensions: 565
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 22
effective length of database: 136,707
effective search space used: 2597433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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