Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13h13
(351 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 4.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 5.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 7.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 20 9.8
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 20 9.8
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 20 9.8
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 20 9.8
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 20 9.8
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 20 9.8
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 20 9.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 9.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 9.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 9.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 9.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 9.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 9.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 9.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 9.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 9.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 9.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 4.2
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -1
Query: 246 WCYHGGGSQ 220
WCY+GG ++
Sbjct: 954 WCYYGGDAR 962
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.6 bits (41), Expect = 5.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 234 HDSTNSISLSKTDNCCSSIHS 296
+D +++L+ T NC SSI S
Sbjct: 144 YDGGANLNLNGTVNCTSSIAS 164
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 311 LNSEINMMRWE 343
LNSE + +RWE
Sbjct: 83 LNSEAHRIRWE 93
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 122 IGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 122 IGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 122 IGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 122 IGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 122 IGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 122 IGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 122 IGPLTPFPPRFIPPDMYRLRPPPNP 146
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 371 IGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 371 IGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 371 IGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 371 IGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 371 IGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 371 IGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 370 IGPLTPFPPRFIPPDMYRLRPPPNP 394
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.8 bits (39), Expect = 9.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 120 SARLQRIGNNGGKH 161
SAR QRIG G H
Sbjct: 396 SARHQRIGGCNGLH 409
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 355 IGPLTPFPPRFIPPDMYRLRPPPNP 379
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 19.8 bits (39), Expect = 9.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 110 IGIKNPPMQRTAPPTMLTIRAVKNP 36
IG P R PP M +R NP
Sbjct: 371 IGPLTPFPPRFIPPDMYRLRPPPNP 395
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,648
Number of Sequences: 438
Number of extensions: 2266
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8060325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -