Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt13g19
(623 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 97 1e-22
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 25 0.79
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 22 4.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 4.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.2
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 97.1 bits (231), Expect = 1e-22
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Frame = +2
Query: 2 RHVLSAGHCFIDTNGNVASPTLFSIRSGSSVLYSGGSIHSVSMIIVHERYNVPIRD---- 169
R+VL+A HC ID N + + S + +HS++ +I+H +Y++ +D
Sbjct: 196 RYVLTAAHCIIDENTTKLAIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQI 255
Query: 170 NDIAVLVLSSPVTLSASVAQACIPVQ-WAEVPDNSSVIHVGWGRTNVNVAQASSVLNEVE 346
NDIA+L + V AC+P Q + + S V +GWG T+ N S +L +
Sbjct: 256 NDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSDVTVLGWGHTSFN-GMLSHILQKTT 314
Query: 347 VRIVNRDVCRTRYEFLESVTGDPFPVTVNMICAGLLDIGGKDACQGDSGGPLIYNN---- 514
+ ++ + C Y G+ + VN +CA GKDACQ DSGGP+++ N
Sbjct: 315 LNMLTQVECYKYY-------GN---IMVNAMCAYAK---GKDACQMDSGGPVLWQNPRTK 361
Query: 515 --IVVGLTSWGYGCAEPMFPGVSARVSSYTNWI 607
+ +G+ SWG C + +P + +V SY +WI
Sbjct: 362 RLVNIGIISWGAECGK--YPNGNTKVGSYIDWI 392
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 24.6 bits (51), Expect = 0.79
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 292 GQD*CERSSSFFSPQRG*GPDSQQGCLPDSVRVSGERDR 408
G D SSFF G PD Q+ + + + G+ DR
Sbjct: 349 GHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGDSDR 387
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 202 CDPERERGASLYT 240
C PER+RG YT
Sbjct: 4 CVPERKRGRQTYT 16
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 113 IHSVSMIIVHERYNVPIRDND 175
IH + ++V RYN P + +D
Sbjct: 346 IHVLPRLLVMRRYNTPSKRSD 366
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 482 LDKRPCLRYRAVPRRSCLR*LGRDPRSRSPETRTES 375
L K+ L Y RR+ + L + +SRSPE+R S
Sbjct: 55 LKKKMILEYEL--RRAREKKLSKRSKSRSPESRGRS 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,473
Number of Sequences: 438
Number of extensions: 4616
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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