Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13g08
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.6  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   7.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.4  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 54  FPVISHRYVRRVRSKE 7
           FP+  ++Y+R + +KE
Sbjct: 316 FPIYKYKYIREIMNKE 331


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 54  FPVISHRYVRRVRSKE 7
           FP+  ++Y+R + +KE
Sbjct: 316 FPIYKYKYIREIMNKE 331


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 78  IYFFQSLLFPVISHRYVRRVRSKEM 4
           IY++  ++  V++H    R ++K+M
Sbjct: 228 IYYYSQIVSHVVNHEKALREQAKKM 252


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 147 DRMFVKKDCMVEINPGRVILP 209
           ++ F+   CM E+NP   I P
Sbjct: 123 EKSFMFMKCMYEVNPIAFIAP 143


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 549 RLPSEYPPAISPKEDGSGCTEVLEGGTS 466
           +LP +  P +SP+ D S  +   E   S
Sbjct: 434 KLPHDDQPPLSPQSDSSSSSRSAESPMS 461


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,038
Number of Sequences: 438
Number of extensions: 4875
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)