Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13f20
         (559 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF012342-1|AAC52079.1|  438|Homo sapiens glutaryl-CoA dehydrogen...   122   6e-28
U69141-1|AAB08455.1|  438|Homo sapiens glutaryl-CoA dehydrogenas...   122   9e-28
BT006706-1|AAP35352.1|  438|Homo sapiens glutaryl-Coenzyme A deh...   122   9e-28
BC002579-1|AAH02579.1|  438|Homo sapiens glutaryl-Coenzyme A deh...   122   9e-28
AD000092-4|AAB51174.1|  438|Homo sapiens glutaryl Co-A dehydroge...   122   9e-28
AY971020-1|AAY18441.1|  169|Homo sapiens immunoglobulin alpha he...    29   8.4  

>AF012342-1|AAC52079.1|  438|Homo sapiens glutaryl-CoA dehydrogenase
           protein.
          Length = 438

 Score =  122 bits (295), Expect = 6e-28
 Identities = 54/103 (52%), Positives = 74/103 (71%)
 Frame = +2

Query: 248 LSTICKSNSIRALSTTYSRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRV 427
           +S+  ++       +  +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR+
Sbjct: 24  VSSAAQTEKAGRTQSQLAKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRI 83

Query: 428 VEANRNEVFHREIYNELGELGALGCTIKGYGCAGVSYVTYGLI 556
           + ANRNEVFHREI +E+GELG LG TIKGYGCAGVS V YGL+
Sbjct: 84  LLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLL 126


>U69141-1|AAB08455.1|  438|Homo sapiens glutaryl-CoA dehydrogenase
           protein.
          Length = 438

 Score =  122 bits (294), Expect = 9e-28
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = +2

Query: 299 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 478
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 479 GELGALGCTIKGYGCAGVSYVTYGLI 556
           GELG LG TIKGYGCAGVS V YGL+
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLL 126


>BT006706-1|AAP35352.1|  438|Homo sapiens glutaryl-Coenzyme A
           dehydrogenase protein.
          Length = 438

 Score =  122 bits (294), Expect = 9e-28
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = +2

Query: 299 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 478
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 479 GELGALGCTIKGYGCAGVSYVTYGLI 556
           GELG LG TIKGYGCAGVS V YGL+
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLL 126


>BC002579-1|AAH02579.1|  438|Homo sapiens glutaryl-Coenzyme A
           dehydrogenase protein.
          Length = 438

 Score =  122 bits (294), Expect = 9e-28
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = +2

Query: 299 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 478
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 479 GELGALGCTIKGYGCAGVSYVTYGLI 556
           GELG LG TIKGYGCAGVS V YGL+
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLL 126


>AD000092-4|AAB51174.1|  438|Homo sapiens glutaryl Co-A
           dehydrogenase protein.
          Length = 438

 Score =  122 bits (294), Expect = 9e-28
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = +2

Query: 299 SRNAKVTFDWVDPFNLDGQLHDDEKAVRDSFRAYCNEKLLPRVVEANRNEVFHREIYNEL 478
           +++++  FDW DP  L+ QL  DE  +RD+FR YC E+L+PR++ ANRNEVFHREI +E+
Sbjct: 41  AKSSRPEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEM 100

Query: 479 GELGALGCTIKGYGCAGVSYVTYGLI 556
           GELG LG TIKGYGCAGVS V YGL+
Sbjct: 101 GELGVLGPTIKGYGCAGVSSVAYGLL 126


>AY971020-1|AAY18441.1|  169|Homo sapiens immunoglobulin alpha heavy
           chain variable region protein.
          Length = 169

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 357 SMTTKKQCEIHSGPTVMKSYYLVWLRQ 437
           S T   +C +  GP V   YY  W+R+
Sbjct: 15  SQTLSLKCSVSGGPVVTTDYYWAWVRR 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,254,118
Number of Sequences: 237096
Number of extensions: 1453555
Number of successful extensions: 3290
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3290
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)