Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt13f16
         (534 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017096-1|AAH17096.1|  302|Homo sapiens alkB, alkylation repair...    85   1e-16
BC002820-1|AAH02820.1|  302|Homo sapiens alkB, alkylation repair...    85   1e-16
AK222689-1|BAD96409.1|  302|Homo sapiens hypothetical protein FL...    85   1e-16
AK000020-1|BAA90888.1|  302|Homo sapiens protein ( Homo sapiens ...    85   1e-16
AK026097-1|BAB15358.1|  229|Homo sapiens protein ( Homo sapiens ...    53   6e-07
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.                  29   7.8  

>BC017096-1|AAH17096.1|  302|Homo sapiens alkB, alkylation repair
           homolog 4 (E. coli) protein.
          Length = 302

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 46/112 (41%), Positives = 61/112 (54%)
 Frame = +2

Query: 194 RPCGCKGCRTCLICETQYGAAXXXXXXXXXXXXSYVYCPYCNKAWKGWDINSYKEHPNHH 373
           R CGCKG RTCLICE Q G+              ++YC     +  GW + +  E  +  
Sbjct: 13  RECGCKGIRTCLICERQRGS-DPPWELPPAKTYRFIYC-----SDTGWAVGT--EESDFE 64

Query: 374 GEPLSYRGVYIHLDFISELEEQILIDNIDEIPWDNSQSGRRKQNYGPKVNFK 529
           G    + GV +  DF++  EE  L+  +D  PW  SQSGRRKQ+YGPKVNF+
Sbjct: 65  GWAFPFPGVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFR 116


>BC002820-1|AAH02820.1|  302|Homo sapiens alkB, alkylation repair
           homolog 4 (E. coli) protein.
          Length = 302

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 46/112 (41%), Positives = 61/112 (54%)
 Frame = +2

Query: 194 RPCGCKGCRTCLICETQYGAAXXXXXXXXXXXXSYVYCPYCNKAWKGWDINSYKEHPNHH 373
           R CGCKG RTCLICE Q G+              ++YC     +  GW + +  E  +  
Sbjct: 13  RECGCKGIRTCLICERQRGS-DPPWELPPAKTYRFIYC-----SDTGWAVGT--EESDFE 64

Query: 374 GEPLSYRGVYIHLDFISELEEQILIDNIDEIPWDNSQSGRRKQNYGPKVNFK 529
           G    + GV +  DF++  EE  L+  +D  PW  SQSGRRKQ+YGPKVNF+
Sbjct: 65  GWAFPFPGVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFR 116


>AK222689-1|BAD96409.1|  302|Homo sapiens hypothetical protein
           FLJ20013 variant protein.
          Length = 302

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 46/112 (41%), Positives = 61/112 (54%)
 Frame = +2

Query: 194 RPCGCKGCRTCLICETQYGAAXXXXXXXXXXXXSYVYCPYCNKAWKGWDINSYKEHPNHH 373
           R CGCKG RTCLICE Q G+              ++YC     +  GW + +  E  +  
Sbjct: 13  RECGCKGIRTCLICERQRGS-DPPWELPPAKTYRFIYC-----SDTGWAVGT--EESDFE 64

Query: 374 GEPLSYRGVYIHLDFISELEEQILIDNIDEIPWDNSQSGRRKQNYGPKVNFK 529
           G    + GV +  DF++  EE  L+  +D  PW  SQSGRRKQ+YGPKVNF+
Sbjct: 65  GWAFPFPGVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFR 116


>AK000020-1|BAA90888.1|  302|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20013 fis, clone ADKA03455. ).
          Length = 302

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 46/112 (41%), Positives = 61/112 (54%)
 Frame = +2

Query: 194 RPCGCKGCRTCLICETQYGAAXXXXXXXXXXXXSYVYCPYCNKAWKGWDINSYKEHPNHH 373
           R CGCKG RTCLICE Q G+              ++YC     +  GW + +  E  +  
Sbjct: 13  RECGCKGIRTCLICERQRGS-DPPWELPPAKTYRFIYC-----SDTGWAVGT--EESDFE 64

Query: 374 GEPLSYRGVYIHLDFISELEEQILIDNIDEIPWDNSQSGRRKQNYGPKVNFK 529
           G    + GV +  DF++  EE  L+  +D  PW  SQSGRRKQ+YGPKVNF+
Sbjct: 65  GWAFPFPGVMLIEDFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFR 116


>AK026097-1|BAB15358.1|  229|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22444 fis, clone HRC09425. ).
          Length = 229

 Score = 53.2 bits (122), Expect = 6e-07
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +2

Query: 413 DFISELEEQILIDNIDEIPWDNSQSGRRKQNYGPKVNFK 529
           DF++  EE  L+  +D  PW  SQSGRRKQ+YGPKVNF+
Sbjct: 5   DFVTREEEAELVRLMDRDPWKLSQSGRRKQDYGPKVNFR 43


>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
          Length = 5262

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = +2

Query: 206 CKGCRTCLICETQYGAAXXXXXXXXXXXXSYVYCPYCNKAWKGWDINSYKE 358
           CK CR C  C    GA             +Y  C  C+KA  G  I S  E
Sbjct: 317 CKACRVCRAC----GAGSAELNPNSEWFENYSLCHRCHKAQGGQTIRSVAE 363


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,017,388
Number of Sequences: 237096
Number of extensions: 1284732
Number of successful extensions: 2532
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)